RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 FAM178BQ8IXR5 827 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 LRRC57Q8N9N7 239 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 CYP2W1Q8TAV3 490 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 STK33Q9BYT3 514 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 VCPKMTQ9H867 229 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 DMAC2Q9NW81 257 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 SMARCAL1Q9NZC9 954 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 SUCLA2Q9P2R7 463 aaPredicted RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 TMEM59LQ9UK28 342 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 NCANO14594 1321 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 CLIC2O15247 247 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 BCRP11274 1271 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 SOX5P35711 763 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 CAP2P40123 477 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 CASP4P49662 377 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 NIPA1Q7RTP0 329 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 ZNF720Q7Z2F6 126 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 SLFN11Q7Z7L1 901 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 APOBEC3FQ8IUX4 373 aaKnown RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 C1orf131Q8NDD1 294 aaKnown RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 TPCN2Q8NHX9 752 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 GDAP1L1Q96MZ0 367 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 ZNF577Q9BSK1 485 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 DIS3Q9Y2L1 958 aaKnown RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 PGRMC1O00264 195 aaKnown RBP15.16■□□□□ 0.02
HMGCL-203ENST00000374490 KCNK3O14649 394 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 PPFIA4O75335 1185 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 ASNSP08243 561 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 NMT1P30419 496 aaKnown RBP15.16■□□□□ 0.02
HMGCL-203ENST00000374490 FMO5P49326 533 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 MAP3K10Q02779 954 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 GUCY2DQ02846 1103 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 CUL1Q13616 776 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 CLUL1Q15846 466 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 RGMBQ6NW40 437 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 SULF1Q8IWU6 871 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 CD302Q8IX05 232 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 HOOK2Q96ED9 719 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 KRT12Q99456 494 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 EPB41L5Q9HCM4 733 aa15.16■□□□□ 0.02
HMGCL-203ENST00000374490 F8VZ95 297 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 CHMP2AO43633 222 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 CFAP58Q5T655 872 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 B3GNT9Q6UX72 402 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 LRRC31Q6UY01 552 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 PEX26Q7Z412 305 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 RASGEF1CQ8N431 466 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 SAMD3Q8N6K7 520 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 TMEM174Q8WUU8 243 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 TEPSINQ96N21 525 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 MXRA8Q9BRK3 442 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 UNC45AQ9H3U1 944 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 AGPAT3Q9NRZ7 376 aa15.15■□□□□ 0.02
HMGCL-203ENST00000374490 SCAF8Q9UPN6 1271 aaKnown RBP15.15■□□□□ 0.02
HMGCL-203ENST00000374490 ADM5C9JUS6 153 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 DDX3XO00571 662 aaKnown RBP eCLIP15.14■□□□□ 0.014e-10■■■■□ 21.5
HMGCL-203ENST00000374490 P4HA2O15460 535 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 GLI1P08151 1106 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 SNRPFP62306 86 aaKnown RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 SKOR1P84550 965 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 MYL7Q01449 175 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 MLLT1Q03111 559 aaPredicted RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 PPP2R5EQ16537 467 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 ODR4Q5SWX8 454 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 DCAF15Q66K64 600 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 DLK2Q6UY11 383 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 TSEN2Q8NCE0 465 aaKnown RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 SLC30A5Q8TAD4 765 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 U2AF1L4Q8WU68 220 aaKnown RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 RIN2Q8WYP3 895 aaPredicted RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 FIZ1Q96SL8 496 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 TIPINQ9BVW5 301 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 ISCUQ9H1K1 167 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 SLITRK6Q9H5Y7 841 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 TMEM206Q9H813 350 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 DNAJC12Q9UKB3 198 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 CEP104O60308 925 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 KRT13P13646 458 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 TAL1P17542 331 aaPredicted RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 HSPA9P38646 679 aaKnown RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 HSD17B4P51659 736 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 CETN1Q12798 172 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 ANGEL2Q5VTE6 544 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms