RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 ANK1P16157 1881 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 K7ENM7 598 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 TUBB4BP68371 445 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 TSR1Q2NL82 804 aaKnown RBP13.75□□□□□ -0.21
PRPF4-202ENST00000374199 CBWD6Q4V339 395 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 CBWD3Q5JTY5 395 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 CBWD5Q5RIA9 395 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 C10orf76Q5T2E6 689 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 PLA2G4FQ68DD2 849 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 CCDC62Q6P9F0 684 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 INTS8Q75QN2 995 aaKnown RBP13.75□□□□□ -0.21
PRPF4-202ENST00000374199 HS2ST1Q7LGA3 356 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
PRPF4-202ENST00000374199 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 MROH8Q9H579 483 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
PRPF4-202ENST00000374199 CLIC2O15247 247 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 FKBP1BP68106 108 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 PRKCEQ02156 737 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 APBA1Q02410 837 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
PRPF4-202ENST00000374199 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 RNF10Q8N5U6 811 aaKnown RBP13.74□□□□□ -0.21
PRPF4-202ENST00000374199 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
PRPF4-202ENST00000374199 ZHX3Q9H4I2 956 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 NPEPPSP55786 919 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 TCEAL1Q15170 157 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 JAKMIP2Q96AA8 810 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 CCDC42Q96M95 316 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 FHOD1Q9Y613 1164 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
PRPF4-202ENST00000374199 KRT86O43790 486 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ZBTB48P10074 688 aaPredicted RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 POLR2FP61218 127 aaKnown RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 WHAMMP3Q1A5X7 153 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 C15orf39Q6ZRI6 1047 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 PORCNQ9H237 461 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 GPRC5CQ9NQ84 441 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 KCNG1Q9UIX4 513 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 MCM3APO60318 1980 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 CTAGE9A4FU28 777 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 OATP04181 439 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ERCC3P19447 782 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 GTF2H1P32780 548 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 NF2P35240 595 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 NAA30Q147X3 362 aaPredicted RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF569Q5MCW4 686 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 METTL7BQ6UX53 244 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ABRAQ8N0Z2 381 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 HSPBP1Q9NZL4 362 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ZBTB42B2RXF5 422 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 GARTP22102 1010 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ITIH3Q06033 890 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 Q3C1V9 767 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 UTP14CQ5TAP6 766 aaKnown RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 MOB2Q70IA6 237 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 TMC2Q8TDI7 906 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 STK33Q9BYT3 514 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 ATP6V0A4Q9HBG4 840 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 GCNT4Q9P109 453 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
PRPF4-202ENST00000374199 INTUQ9ULD6 942 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 FRMD4BQ9Y2L6 1034 aa13.73□□□□□ -0.21
PRPF4-202ENST00000374199 F8VZ95 297 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 ACTN1P12814 892 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 RFC5P40937 340 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 KIF22Q14807 665 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 XKR9Q5GH70 373 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 SWSAP1Q6NVH7 229 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 SRGAP1Q7Z6B7 1085 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 CBWD1Q9BRT8 395 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 KATNBL1Q9H079 304 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 H0YCG3 227 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 RRP9O43818 475 aaKnown RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 NEDD9Q14511 834 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 FMNL3Q8IVF7 1028 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms