RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 RRP15Q9Y3B9 282 aaKnown RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 Q9Y3F1 56 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 A6NJR5 290 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 TBX3O15119 743 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 NFASCO94856 1347 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 EHHADHQ08426 723 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 STK4Q13043 487 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 MTF1Q14872 753 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 CSGALNACT2Q8N6G5 542 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 SNX29Q8TEQ0 813 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 EMID1Q96A84 441 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 PAWRQ96IZ0 340 aaKnown RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 DUSP9Q99956 384 aaKnown RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 DESI2Q9BSY9 194 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 SENP6Q9GZR1 1112 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 TBC1D22BQ9NU19 505 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 PCDH10Q9P2E7 1040 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 VAV3Q9UKW4 847 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 SASH3O75995 380 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 URI1O94763 535 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-203ENST00000374116 MARK3P27448 753 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 ACTN2P35609 894 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 CPT1AP50416 773 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 DNM2P50570 870 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 GTF2A1P52655 376 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-203ENST00000374116 SPIRE1Q08AE8 756 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-203ENST00000374116 MCM6Q14566 821 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 NCAPH2Q6IBW4 605 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 CYP26C1Q6V0L0 522 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 SLFN12Q8IYM2 578 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 ARRDC4Q8NCT1 418 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 ZNF507Q8TCN5 953 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 VTI1AQ96AJ9 217 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 FAM20AQ96MK3 541 aa15.67■□□□□ 0.1
HMGA1-203ENST00000374116 KBTBD13C9JR72 458 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 POLR3GO15318 223 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-203ENST00000374116 ACLYP53396 1101 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-203ENST00000374116 PURAQ00577 322 aaKnown RBP15.66■□□□□ 0.1
HMGA1-203ENST00000374116 DGKDQ16760 1214 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 ANKRD40Q6AI12 368 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 MNS1Q8NEH6 495 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 PCYT2Q99447 389 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 RIT2Q99578 217 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 NCAPGQ9BPX3 1015 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 MRPL44Q9H9J2 332 aaKnown RBP15.66■□□□□ 0.1
HMGA1-203ENST00000374116 TCEAL9Q9UHQ7 104 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 FANCGO15287 622 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 LGALS2P05162 132 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 KRT9P35527 623 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 MAGEA9P43362 315 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 SWSAP1Q6NVH7 229 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 MIER3Q7Z3K6 550 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 CCDC60Q8IWA6 550 aaPredicted RBP15.66■□□□□ 0.1
HMGA1-203ENST00000374116 SEPT1Q8WYJ6 367 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 WDR24Q96S15 920 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 TUBGCP2Q9BSJ2 902 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 LCMT1Q9UIC8 334 aa15.66■□□□□ 0.1
HMGA1-203ENST00000374116 KDM3AQ9Y4C1 1321 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 WDR81Q562E7 1941 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 A0A1W2PQ45 241 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-203ENST00000374116 A0A1W2PQY0 241 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 DNM1LO00429 736 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 BACH1O14867 736 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 CST5P28325 142 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-203ENST00000374116 PSMD2Q13200 908 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 UGCGQ16739 394 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 C10orf67Q8IYJ2 551 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 BANK1Q8NDB2 785 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 KAT2BQ92831 832 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 GLG1Q92896 1179 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 MYCBPQ99417 103 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-203ENST00000374116 C16orf70Q9BSU1 422 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 NUP58Q9BVL2 599 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 NT5C3AQ9H0P0 336 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 RGL1Q9NZL6 768 aa15.65■□□□□ 0.1
HMGA1-203ENST00000374116 TRIM66O15016 1216 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 PPFIA4O75335 1185 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 KRT76Q01546 638 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 CYP4A11Q02928 519 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 BRDTQ58F21 947 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 CENPPQ6IPU0 288 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 ZNF746Q6NUN9 644 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 B3GNT9Q6UX72 402 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 RSRC2Q7L4I2 434 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 PCSK9Q8NBP7 692 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 RETREG2Q8NC44 543 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 OR8K1Q8NGG5 319 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 DNAJC19Q96DA6 116 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 GABBR1Q9UBS5 961 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 CAPN11Q9UMQ6 739 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 LUC7L2Q9Y383 392 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 TMEM150BA6NC51 233 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 RNF225M0QZC1 329 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 MAP2K7O14733 419 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms