RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZRANB2O95218 330 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTPRU-202ENST00000373779 BRAFP15056 766 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 PRLRP16471 622 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 NR1H3Q13133 447 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM50Q86XT4 487 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 ANKS1AQ92625 1134 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 THOC1Q96FV9 657 aaKnown RBP18.67■□□□□ 0.58
PTPRU-202ENST00000373779 TJP3O95049 919 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 CCND2P30279 289 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 LRRC14Q15048 493 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 PROCA1Q8NCQ7 364 aaPredicted RBP18.67■□□□□ 0.58
PTPRU-202ENST00000373779 GABPB2Q8TAK5 448 aaPredicted RBP18.67■□□□□ 0.58
PTPRU-202ENST00000373779 CDKL2Q92772 493 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 REEP2Q9BRK0 252 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 ADAM22Q9P0K1 906 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 SLC26A4O43511 780 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 SMIM24O75264 130 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 BBS9Q3SYG4 887 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 FAM160B1Q5W0V3 765 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 STK33Q9BYT3 514 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 EIF2AK2P19525 551 aaKnown RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 FGFR4P22455 802 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 TPD52P55327 224 aaPredicted RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 EMSYQ7Z589 1322 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 SLC9A1P19634 815 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 NMT1P30419 496 aaKnown RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 MDM2Q00987 491 aaPredicted RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 PRKG1Q13976 671 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 SPATS2LQ9NUQ6 558 aaKnown RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 HESX1Q9UBX0 185 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 F5H6K3 240 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 ATP5HO75947 161 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 KLRC3Q07444 240 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 SNF8Q96H20 258 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 TGS1Q96RS0 853 aaKnown RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 ECT2Q9H8V3 914 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 FAM217BQ9NTX9 383 aaPredicted RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 ABCB11O95342 1321 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 AGTP01019 485 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 PDHBP11177 359 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 SMARCA1P28370 1054 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 MTERF2Q49AM1 385 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 ARHGEF1Q92888 912 aaKnown RBP18.66■□□□□ 0.58
PTPRU-202ENST00000373779 ANKRD36BP1Q96IX9 119 aa18.66■□□□□ 0.58
PTPRU-202ENST00000373779 NPR1P16066 1061 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 PTGISQ16647 500 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM59Q8IWR1 403 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 RBM41Q96IZ5 413 aaKnown RBP18.65■□□□□ 0.58
PTPRU-202ENST00000373779 SLC16A4O15374 487 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 APBA3O96018 575 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 CD58P19256 250 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 DCAF15Q66K64 600 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 DARS2Q6PI48 645 aaKnown RBP18.65■□□□□ 0.58
PTPRU-202ENST00000373779 PDIK1LQ8N165 341 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 KCTD6Q8NC69 237 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 ESYT2A0FGR8 921 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 PSAPP07602 524 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 MIPOL1Q8TD10 442 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 LXNQ9BS40 222 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 CALN1Q9BXU9 219 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 HAUS2Q9NVX0 235 aa18.65■□□□□ 0.58
PTPRU-202ENST00000373779 CRCPO75575 148 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 CPP00450 1065 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 CHN1P15882 459 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 JAK3P52333 1124 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 SEC24CP53992 1094 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 KDM7AQ6ZMT4 941 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 CYFIP2Q96F07 1278 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 TTC25Q96NG3 672 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 APEX2Q9UBZ4 518 aa18.64■□□□□ 0.58
PTPRU-202ENST00000373779 PHF2O75151 1096 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 GRB10Q13322 594 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 PSMD6Q15008 389 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 CDHR1Q96JP9 859 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 TUFT1Q9NNX1 390 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 A0A087X0B3 334 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 FAM107AO95990 144 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 SERPINB6P35237 376 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 HSPA9P38646 679 aaKnown RBP18.64■□□□□ 0.57
PTPRU-202ENST00000373779 GARSP41250 739 aaKnown RBP18.64■□□□□ 0.57
PTPRU-202ENST00000373779 EARS2Q5JPH6 523 aaKnown RBP18.64■□□□□ 0.57
PTPRU-202ENST00000373779 DDX42Q86XP3 938 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTPRU-202ENST00000373779 PRMT1Q99873 361 aaKnown RBP18.64■□□□□ 0.57
PTPRU-202ENST00000373779 GINM1Q9NU53 330 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 RGL1Q9NZL6 768 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 IQANK1A0A1B0GTG1 560 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 MYBP10242 640 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 RASIP1Q5U651 963 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 C1orf54Q8WWF1 131 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 CASKIN2Q8WXE0 1202 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 SEC16BQ96JE7 1060 aa18.64■□□□□ 0.57
PTPRU-202ENST00000373779 A6NJR5 290 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 PHF20L1A8MW92 1017 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 IPO5O00410 1097 aaKnown RBP18.63■□□□□ 0.57
PTPRU-202ENST00000373779 MED7O43513 233 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 KCNQ2O43526 872 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 RTN2O75298 545 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 ESRRAP11474 423 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms