RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 FAM187AA6NFU0 413 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 POTECB2RU33 542 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 KDM1AO60341 852 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 POTEBQ6S5H4 581 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 MAML1Q92585 1016 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 HSPH1Q92598 858 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 HEXIM2Q96MH2 286 aaKnown RBP15.17■□□□□ 0.02
LMX1B-202ENST00000373474 BATF3Q9NR55 127 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 IRAK4Q9NWZ3 460 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 ATP6V1E1P36543 226 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 KCNQ4P56696 695 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 MTF1Q14872 753 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 SCARA5Q6ZMJ2 495 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 DNAAF3Q8N9W5 541 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 CEP95Q96GE4 821 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 TTC25Q96NG3 672 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 RPS6KC1Q96S38 1066 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 PHF20Q9BVI0 1012 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 TLK1Q9UKI8 766 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 CHRNA3P32297 505 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 ARL4CP56559 192 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 DPYDQ12882 1025 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 PARP9Q8IXQ6 854 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 ANKRD7Q92527 254 aa15.17■□□□□ 0.02
LMX1B-202ENST00000373474 RPF1Q9H9Y2 349 aaKnown RBP15.17■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 TRMT10CQ7L0Y3 403 aaKnown RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 XXYLT1Q8NBI6 393 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 COG1Q8WTW3 980 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 PLA2G12BQ9BX93 195 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 CPVLQ9H3G5 476 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 NOC2LQ9Y3T9 749 aaKnown RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 GYG2O15488 501 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ZBED1O96006 694 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 OSBPP22059 807 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 RFX1P22670 979 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 EPM2AIP1Q7L775 607 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 NUP85Q9BW27 656 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 KIAA1586Q9HCI6 787 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 CTIFO43310 598 aaKnown RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ARHGDIAP52565 204 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 FLOT2Q14254 428 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ANO5Q75V66 913 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 KIAA2013Q8IYS2 634 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ZNF564Q8TBZ8 553 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ZC3H13Q5T200 1668 aaKnown RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ABL1P00519 1130 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 APOA1P02647 267 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 EIF2AK2P19525 551 aaKnown RBP15.16■□□□□ 0.02
LMX1B-202ENST00000373474 AP2B1P63010 937 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 SCARF1Q14162 830 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ANKRD40Q6AI12 368 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 PADI6Q6TGC4 694 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 RASGRP2Q7LDG7 609 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 FAM149B1Q96BN6 582 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 EDEM3Q9BZQ6 932 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 ADAM22Q9P0K1 906 aa15.16■□□□□ 0.02
LMX1B-202ENST00000373474 GGPS1O95749 300 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 FCER1AP12319 257 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 CRKP46108 304 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 FMR1Q06787 632 aaKnown RBP eCLIP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 THOC5Q13769 683 aaKnown RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 TMTC4Q5T4D3 741 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 RASA4BC9J798 803 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 RASA4O43374 803 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 FSCBQ5H9T9 825 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 RCSD1Q6JBY9 416 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 WARS2Q9UGM6 360 aaKnown RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 A0A1B0GW55 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4L2P0CJ85 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4L3P0CJ86 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4L4P0CJ87 422 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4L5P0CJ88 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4L6P0CJ89 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4L7P0CJ90 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DRP2Q13474 957 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 ADGRF4Q8IZF3 695 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 FAM193BQ96PV7 902 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 TRIM55Q9BYV6 548 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 SEL1LQ9UBV2 794 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DUX4Q9UBX2 424 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L15C9J2P7 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L13C9JLJ4 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L11C9JVI0 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L18D6R9N7 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L22D6RA61 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L17D6RBQ6 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L19D6RCP7 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L20D6RJB6 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 K7ERI5 159 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms