RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LBRQ14739 615 aaKnown RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 ZNF568Q3ZCX4 644 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 CDKL3Q8IVW4 592 aaPredicted RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 IP6K2Q9UHH9 426 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 IGSF1Q8N6C5 1336 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 EFTUD2Q15029 972 aaKnown RBP eCLIP12.29□□□□□ -0.442e-6■■■□□ 18.1
VCL-202ENST00000372755 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 NR1H4Q96RI1 486 aaPredicted RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 LGALS16A8MUM7 142 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 HDLBPQ00341 1268 aaKnown RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 KCNA1Q09470 495 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 HAUS5O94927 633 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 SFNP31947 248 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 GRAMD4Q6IC98 578 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 SFR1Q86XK3 245 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 PDCD6IPQ8WUM4 868 aaKnown RBP12.29□□□□□ -0.44
VCL-202ENST00000372755 TEKT4Q8WW24 435 aa12.29□□□□□ -0.44
VCL-202ENST00000372755 ABCB11O95342 1321 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 STK36Q9NRP7 1315 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 CYP2D7A0A087X1C5 515 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 GRID2IPA4D2P6 1211 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
VCL-202ENST00000372755 KRT7P08729 469 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 TMEM270Q6UE05 265 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 TRIM62Q9BVG3 475 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 HEY1Q9Y5J3 304 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 PLEKHA8P1O95397 391 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 RASGRF1Q13972 1273 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 C1orf146Q5VVC0 180 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 PATL1Q86TB9 770 aaKnown RBP12.28□□□□□ -0.44
VCL-202ENST00000372755 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
VCL-202ENST00000372755 MASTLQ96GX5 879 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 PMS2P54278 862 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 SNAP25P60880 206 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 PTPN12Q05209 780 aaKnown RBP12.28□□□□□ -0.44
VCL-202ENST00000372755 ZNF394Q53GI3 561 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 HEATR6Q6AI08 1181 aaKnown RBP12.28□□□□□ -0.44
VCL-202ENST00000372755 PI16Q6UXB8 463 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 PIGOQ8TEQ8 1089 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 CHAMP1Q96JM3 812 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 HEMGNQ9BXL5 484 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 M0QYV0 167 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 MAN1A2O60476 641 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 EFHC2Q5JST6 749 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
VCL-202ENST00000372755 DACH2Q96NX9 599 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 RMDN3Q96TC7 470 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 TRIM54Q9BYV2 358 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 STOML1Q9UBI4 398 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 GOLGA8MH3BSY2 632 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
VCL-202ENST00000372755 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 GH2P01242 217 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.44
VCL-202ENST00000372755 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 C16orf87Q6PH81 154 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 ZNF564Q8TBZ8 553 aaPredicted RBP12.27□□□□□ -0.44
VCL-202ENST00000372755 NSUN6Q8TEA1 469 aaKnown RBP12.27□□□□□ -0.44
VCL-202ENST00000372755 YY1AP1Q9H869 796 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 ABHD10Q9NUJ1 306 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 CDV3Q9UKY7 258 aaKnown RBP12.27□□□□□ -0.44
VCL-202ENST00000372755 A0A087WWV3 80 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.44
VCL-202ENST00000372755 RXRBP28702 533 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 HDAC4P56524 1084 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 CCNYL1Q8N7R7 359 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 SH3TC2Q8TF17 1288 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 TSC22D3Q99576 134 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 EGFL8Q99944 293 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 SP110Q9HB58 689 aa12.27□□□□□ -0.44
VCL-202ENST00000372755 E9PMD0 336 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 CHRNA3P32297 505 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
VCL-202ENST00000372755 MAPRE2Q15555 327 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 SARM1Q6SZW1 724 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 TTLL6Q8N841 843 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 FAM213AQ9BRX8 229 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
VCL-202ENST00000372755 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ADAMTS12P58397 1594 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ZFXP17010 805 aaPredicted RBP12.27□□□□□ -0.45
VCL-202ENST00000372755 GCLMP48507 274 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ROR1Q01973 937 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ASIC4Q96FT7 647 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 SPATA17Q96L03 361 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 ZMAT2Q96NC0 199 aaKnown RBP12.27□□□□□ -0.45
VCL-202ENST00000372755 NUP85Q9BW27 656 aa12.27□□□□□ -0.45
VCL-202ENST00000372755 LRRC53A6NM62 1247 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms