RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SEMA4AQ9H3S1 761 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
COL9A2-202ENST00000372748 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
COL9A2-202ENST00000372748 RGS16O15492 202 aaPredicted RBP16.03■□□□□ 0.16
COL9A2-202ENST00000372748 NEBLO76041 1014 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 PRKCIP41743 596 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 PTENP60484 403 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 TCP10Q12799 353 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 EPS8L3Q8TE67 593 aaKnown RBP16.03■□□□□ 0.16
COL9A2-202ENST00000372748 SEPT11Q9NVA2 429 aaKnown RBP16.03■□□□□ 0.16
COL9A2-202ENST00000372748 SAMD15Q9P1V8 674 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 PCDHAC2Q9Y5I4 1007 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 MMP13P45452 471 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 KNOP1Q1ED39 458 aaKnown RBP16.03■□□□□ 0.16
COL9A2-202ENST00000372748 NBPF9Q3BBW0 867 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 DUPD1Q68J44 220 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 NSMCE1Q8WV22 266 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 SLC24A3Q9HC58 644 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 NENFQ9UMX5 172 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
COL9A2-202ENST00000372748 EVI5O60447 810 aa16.02■□□□□ 0.16
COL9A2-202ENST00000372748 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
COL9A2-202ENST00000372748 FGFR4P22455 802 aa16.02■□□□□ 0.16
COL9A2-202ENST00000372748 KLRC3Q07444 240 aa16.02■□□□□ 0.16
COL9A2-202ENST00000372748 FRMD5Q7Z6J6 570 aa16.02■□□□□ 0.16
COL9A2-202ENST00000372748 KDM3AQ9Y4C1 1321 aa16.02■□□□□ 0.16
COL9A2-202ENST00000372748 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 DDX3YO15523 660 aaKnown RBP16.02■□□□□ 0.15
COL9A2-202ENST00000372748 RSPH10BP0C881 870 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 CDC25CP30307 473 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 KCNJ2P63252 427 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.15
COL9A2-202ENST00000372748 LRRC14Q15048 493 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 CDC42EP5Q6NZY7 148 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 TRPM8Q7Z2W7 1104 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 PIGWQ7Z7B1 504 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 JAMLQ86YT9 394 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 ZC3H3Q8IXZ2 948 aaKnown RBP16.02■□□□□ 0.15
COL9A2-202ENST00000372748 MGARPQ8TDB4 240 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 ALG3Q92685 438 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 SLC35C1Q96A29 364 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 CENPTQ96BT3 561 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 ARHGEF26Q96DR7 871 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 DHX36Q9H2U1 1008 aaKnown RBP16.02■□□□□ 0.15
COL9A2-202ENST00000372748 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.15
COL9A2-202ENST00000372748 PLIN4Q96Q06 1357 aa16.02■□□□□ 0.15
COL9A2-202ENST00000372748 A0A1B0GUA9 196 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 PPEF1O14829 653 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-202ENST00000372748 HGSO14964 777 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-202ENST00000372748 JAM2P57087 298 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 QRICH1Q2TAL8 776 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 ZDHHC24Q6UX98 284 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
COL9A2-202ENST00000372748 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 CCDC169A6NNP5 214 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 NUDT17P0C025 328 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 SLC12A3P55017 1021 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 KIAA1755Q5JYT7 1200 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 FAXDC2Q96IV6 333 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 TAS2R14Q9NYV8 317 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 RPTORQ8N122 1335 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 A0A0A6YYK5 440 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-202ENST00000372748 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 SFI1A8K8P3 1242 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 ASAP2O43150 1006 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 NR3C1P04150 777 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 HOXA7P31268 230 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-202ENST00000372748 GIT2Q14161 759 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 CRYMQ14894 314 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 PALB2Q86YC2 1186 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 PGM2Q96G03 612 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 CHORDC1Q9UHD1 332 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-202ENST00000372748 TRAF3IP3Q9Y228 551 aa16.01■□□□□ 0.15
COL9A2-202ENST00000372748 KIAA0391O15091 583 aaKnown RBP16■□□□□ 0.15
COL9A2-202ENST00000372748 UBOX5O94941 541 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 STAT1P42224 750 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 PLS1Q14651 629 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 HYIQ5T013 277 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 GPATCH4Q5T3I0 446 aaKnown RBP16■□□□□ 0.15
COL9A2-202ENST00000372748 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 TAX1BP1Q86VP1 789 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 CTNNBL1Q8WYA6 563 aaPredicted RBP16■□□□□ 0.15
COL9A2-202ENST00000372748 PRCCQ92733 491 aaPredicted RBP16■□□□□ 0.15
COL9A2-202ENST00000372748 THAP2Q9H0W7 228 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 MLXIPLQ9NP71 852 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 TRPC6Q9Y210 931 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 G3V3G9 751 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 ANP32DO95626 131 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 PPP1R18Q6NYC8 613 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 CATSPER3Q86XQ3 398 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 KIF2BQ8N4N8 673 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 AGAP11Q8TF27 550 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 RFFLQ8WZ73 363 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms