RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, human

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCMH1-207	ENST00000372597	ERP44	Q9BS26	406 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	OLFML3	Q9NRN5	406 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	LRRC4B	Q9NT99	713 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	APEX2	Q9UBZ4	518 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	MTRF1L	Q9UGC7	380 aa	Known RBP	11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	PNMA2	Q9UL42	364 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	PCDHAC2	Q9Y5I4	1007 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	NFS1	Q9Y697	457 aa		11.56	□□□□□ -0.56
SCMH1-207	ENST00000372597	TRAPPC3	O43617	180 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	HOXA10	P31260	410 aa	Predicted RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	BMT2	Q1RMZ1	405 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	EMC10	Q5UCC4	262 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CEP57	Q86XR8	500 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	RASGEF1C	Q8N431	466 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.55	□□□□□ -0.56	3e-7	■■□□□ 13.1
SCMH1-207	ENST00000372597	DNAJC18	Q9H819	358 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	TAS2R14	Q9NYV8	317 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CNOT8	Q9UFF9	292 aa	Known RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	COL5A3	P25940	1745 aa	Predicted RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CCDC169	A6NNP5	214 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	FOXN3	O00409	490 aa	Predicted RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	FTL	P02792	175 aa	Predicted RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	SLCO1A2	P46721	670 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	KCNV1	Q6PIU1	500 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	YTHDF3	Q7Z739	585 aa	Known RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CCDC105	Q8IYK2	499 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CARD9	Q9H257	536 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	TAOK3	Q9H2K8	898 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	STXBP5L	Q9Y2K9	1186 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	PTPN22	Q9Y2R2	807 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	ALG6	Q9Y672	507 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	ANKRD62	A6NC57	917 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	EIF3D	O15371	548 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	SPOP	O43791	374 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CAND2	O75155	1236 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	VIM	P08670	466 aa	Known RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	PMS2	P54278	862 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	PTEN	P60484	403 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	ACTN3	Q08043	901 aa	Predicted RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	KIAA1755	Q5JYT7	1200 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	SEL1L2	Q5TEA6	688 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	DPY19L2P1	Q6NXN4	242 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	ANKS4B	Q8N8V4	417 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	DYDC1	Q8WWB3	177 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	MKL1	Q969V6	931 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	SCLT1	Q96NL6	688 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	NACC1	Q96RE7	527 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	CNOT10	Q9H9A5	744 aa	Known RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	KCNQ5	Q9NR82	932 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	AGPAT3	Q9NRZ7	376 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	SLC12A6	Q9UHW9	1150 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	VAV3	Q9UKW4	847 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	DIS3	Q9Y2L1	958 aa	Known RBP	11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597	IGSF9B	Q9UPX0	1349 aa		11.55	□□□□□ -0.56
SCMH1-207	ENST00000372597		K7ENM7	598 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	DDR1	Q08345	913 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	QPCT	Q16769	361 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	JAML	Q86YT9	394 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	FBXO25	Q8TCJ0	367 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	VCPKMT	Q9H867	229 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	KLC4	Q9NSK0	619 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ZBTB21	Q9ULJ3	1066 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	SLITRK3	O94933	977 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	POLR2M	P0CAP2	368 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	POLD1	P28340	1107 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	IFNAR2	P48551	515 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ZYX	Q15942	572 aa	Known RBP	11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	AADACL2	Q6P093	401 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	RHOT2	Q8IXI1	618 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	AGPAT1	Q99943	283 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ZNF577	Q9BSK1	485 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	MKNK1	Q9BUB5	465 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	MTUS1	Q9ULD2	1270 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	MYH4	Q9Y623	1939 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ATXN2	Q99700	1313 aa	Known RBP	11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	MME	P08473	750 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	GCLM	P48507	274 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	CLUL1	Q15846	466 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	C1orf186	Q6ZWK4	172 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ZNF720	Q7Z2F6	126 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ARMC9	Q7Z3E5	817 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	PALB2	Q86YC2	1186 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	SLC20A1	Q8WUM9	679 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ALG3	Q92685	438 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	C18orf8	Q96DM3	657 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	CHMP6	Q96FZ7	201 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	ERVK-5	Q9HDB9	667 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	TUFT1	Q9NNX1	390 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	PRR12	Q9ULL5	1215 aa		11.54	□□□□□ -0.56
SCMH1-207	ENST00000372597	FAM187A	A6NFU0	413 aa		11.53	□□□□□ -0.56
SCMH1-207	ENST00000372597	SHBG	P04278	402 aa		11.53	□□□□□ -0.56
SCMH1-207	ENST00000372597	FNTA	P49354	379 aa		11.53	□□□□□ -0.56
SCMH1-207	ENST00000372597	STAT2	P52630	851 aa		11.53	□□□□□ -0.56
SCMH1-207	ENST00000372597	BFSP1	Q12934	665 aa		11.53	□□□□□ -0.56
SCMH1-207	ENST00000372597	BYSL	Q13895	437 aa	Known RBP	11.53	□□□□□ -0.56
SCMH1-207	ENST00000372597	SLC29A2	Q14542	456 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms