RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TMA7Q9Y2S6 64 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 CYP2E1P05181 493 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 KRR1Q13601 381 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 C1orf146Q5VVC0 180 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 HESX1Q9UBX0 185 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 PFDN6O15212 129 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 ANGEL2Q5VTE6 544 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 TEX12Q9BXU0 123 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 HAUS4Q9H6D7 363 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZSWIM5Q9P217 1185 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZNF189O75820 626 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 CELF2O95319 508 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 UBE3AQ05086 875 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 KSR1Q8IVT5 923 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 ANKRD36BP1Q96IX9 119 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZFYVE28Q9HCC9 887 aa15.01□□□□□ -0.01
RAPGEF1-202ENST00000372190 PSMD14O00487 310 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 TMCC1O94876 653 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 PIK3CAP42336 1068 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 GMPSP49915 693 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 PLD3Q8IV08 490 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 GIMAP8Q8ND71 665 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZFYVE19Q96K21 471 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 FAM84BQ96KN1 310 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 SNX25Q9H3E2 840 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 ORC4O43929 436 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 STRBPQ96SI9 672 aaKnown RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 KLHL25Q9H0H3 589 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 NLRC4Q9NPP4 1024 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 GGA3Q9NZ52 723 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 COPB2P35606 906 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 BSPRYQ5W0U4 402 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 TDRD7Q8NHU6 1098 aaKnown RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 UBN2Q6ZU65 1347 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L15C9J2P7 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L13C9JLJ4 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L11C9JVI0 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L18D6R9N7 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L22D6RA61 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L17D6RBQ6 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L19D6RCP7 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L20D6RJB6 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 POC1B-GALNT4F8VUJ3 575 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP17L24Q0WX57 530 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 TCP11X2Q5H9J9 407 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 CCDC149Q6ZUS6 474 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 AHI1Q8N157 1196 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 RAB20Q9NX57 234 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 HERC5Q9UII4 1024 aaKnown RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 CPS1P31327 1500 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 E2F6O75461 281 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 RPN1P04843 607 aaKnown RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 CCDC103Q8IW40 242 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZNF34Q8IZ26 560 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 FAM49AQ9H0Q0 323 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-202ENST00000372190 MYO1AQ9UBC5 1043 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 DKK3Q9UBP4 350 aa15□□□□□ -0.01
RAPGEF1-202ENST00000372190 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 NCF2P19878 526 aaPredicted RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 SNAPC2Q13487 334 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 CDR2LQ86X02 465 aaPredicted RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 HIC2Q96JB3 615 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 UBE2OQ9C0C9 1292 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 FANCLQ9NW38 375 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 EIF4E1BA6NMX2 242 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 GOLGA8CPA6NN73 597 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 KIF11P52732 1056 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 ARPP19P56211 112 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 DEPDC1Q5TB30 811 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 PCDHA7Q9UN72 937 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 OATP04181 439 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 CTTNQ14247 550 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 RARS2Q5T160 578 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 CAPN12Q6ZSI9 719 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 COL23A1Q86Y22 540 aaPredicted RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 C7orf31Q8N865 590 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 U2AF1L4Q8WU68 220 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 TRAPPC10P48553 1259 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 FOXO4P98177 505 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 HIPK4Q8NE63 616 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 CCDC127Q96BQ5 260 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 THOC1Q96FV9 657 aaKnown RBP14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 OSBPL3Q9H4L5 887 aa14.99□□□□□ -0.01
RAPGEF1-202ENST00000372190 RNF103-CHMP3A0A140T963 221 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 IFNB1P01574 187 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 EIF3BP55884 814 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 HUNKP57058 714 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 RCSD1Q6JBY9 416 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 MPP4Q96JB8 637 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 LRRC37BQ96QE4 947 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 RMDN3Q96TC7 470 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 FOXP1Q9H334 677 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 RNF146Q9NTX7 359 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 BFSP1Q12934 665 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 DGKHQ86XP1 1220 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 SIX5Q8N196 739 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 CLMNQ96JQ2 1002 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms