RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 USPL1Q5W0Q7 1092 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 PROM2Q8N271 834 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 C9orf72Q96LT7 481 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 HAUS8Q9BT25 410 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 PCDHA1Q9Y5I3 950 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
GPC4-201ENST00000370828 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 PAX3P23760 479 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 ATP2C1P98194 919 aaPredicted RBP13.54□□□□□ -0.24
GPC4-201ENST00000370828 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 USP17L2Q6R6M4 530 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 C3orf20Q8ND61 904 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 MCUQ8NE86 351 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 CALN1Q9BXU9 219 aa13.54□□□□□ -0.24
GPC4-201ENST00000370828 MAGEA13PA6NCF6 341 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 KRT37O76014 449 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 MXI1P50539 228 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 AOC3Q16853 763 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 FLCNQ8NFG4 579 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 NYXQ9GZU5 481 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 CNOT8Q9UFF9 292 aaKnown RBP13.53□□□□□ -0.24
GPC4-201ENST00000370828 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 UFL1O94874 794 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 KRT17Q04695 432 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 DARS2Q6PI48 645 aaKnown RBP13.53□□□□□ -0.24
GPC4-201ENST00000370828 POMGNT1Q8WZA1 660 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 RNF34Q969K3 372 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 THTPAQ9BU02 230 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 PDP2Q9P2J9 529 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 SH3BP1Q9Y3L3 701 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
GPC4-201ENST00000370828 KRT3P12035 628 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 COPB2P35606 906 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 CPA2P48052 419 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 BPIFB4P59827 614 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 CAV1Q03135 178 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 HIC1Q14526 733 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 TRIP10Q15642 601 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 CNGA3Q16281 694 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 DPP8Q6V1X1 898 aaPredicted RBP13.53□□□□□ -0.24
GPC4-201ENST00000370828 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 CPXCR1Q8N123 301 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 MAGED2Q9UNF1 606 aaPredicted RBP13.53□□□□□ -0.24
GPC4-201ENST00000370828 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 REREQ9P2R6 1566 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 LPXNO60711 386 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 FTLP02792 175 aaPredicted RBP13.53□□□□□ -0.24
GPC4-201ENST00000370828 ATP6V1B1P15313 513 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 PHKG2P15735 406 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 UBE2SQ16763 222 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
GPC4-201ENST00000370828 PIGOQ8TEQ8 1089 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 RFFLQ8WZ73 363 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 BHMTQ93088 406 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 SNF8Q96H20 258 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
GPC4-201ENST00000370828 UGGT1Q9NYU2 1555 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 GLI1P08151 1106 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 ARL4CP56559 192 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 DNAJC3Q13217 504 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 IZUMO3Q5VZ72 239 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 CC2D2BQ6DHV5 1058 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 CAPN9O14815 690 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 SYF2O95926 243 aaKnown RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 ACADSP16219 412 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.24
GPC4-201ENST00000370828 ARPC4P59998 168 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 MECOMQ03112 1051 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 CHRNDQ07001 517 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 TCP10Q12799 353 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 COASYQ13057 564 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 XKR9Q5GH70 373 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 GUF1Q8N442 669 aaKnown RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 FAM81AQ8TBF8 368 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.24
GPC4-201ENST00000370828 HDAC11Q96DB2 347 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 MTBPQ96DY7 904 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 CPVLQ9H3G5 476 aa13.52□□□□□ -0.24
GPC4-201ENST00000370828 ZNF609O15014 1411 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 CASP2P42575 452 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 LIG4P49917 911 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 ALDH18A1P54886 795 aaKnown RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 PDIA2Q13087 525 aaKnown RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 ITIH4Q14624 930 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 JAMLQ86YT9 394 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 SLC13A1Q9BZW2 595 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms