RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 GBP5Q96PP8 586 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 MMTAG2Q9BU76 263 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 CFAP73A6NFT4 308 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 GOLGA8SH3BPF8 625 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 GOLGA8MH3BSY2 632 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 NOL4O94818 638 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 CA4P22748 312 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 MARCKSL1P49006 195 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 DGKHQ86XP1 1220 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 CD302Q8IX05 232 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 ACP6Q9NPH0 428 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 ALG6Q9Y672 507 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 ADAMTSL3P82987 1691 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 LRRC55Q6ZSA7 311 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 HIPK4Q8NE63 616 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 TEKT4Q8WW24 435 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 RUBCNQ92622 972 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 LRRC37BQ96QE4 947 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 CARD10Q9BWT7 1032 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 A1CFQ9NQ94 594 aaKnown RBP11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 USP40Q9NVE5 1235 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 PCDHGC5Q9Y5F6 944 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 RIC1Q4ADV7 1423 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.62
PRPF38B-201ENST00000370021 CFAP69A5D8W1 941 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 FAM196BA6NMK8 535 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CCND1P24385 295 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CTNNA2P26232 953 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 NMT1P30419 496 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CASP5P51878 434 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 OVGP1Q12889 678 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CTTNQ14247 550 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 RCN2Q14257 317 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 MDH1BQ5I0G3 518 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 TXNRD3Q86VQ6 643 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ERMNQ8TAM6 284 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 KRT35Q92764 455 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF512BQ96KM6 892 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 RAB3IPQ96QF0 476 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 KLF6Q99612 283 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 TAS2R14Q9NYV8 317 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CLDN3O15551 220 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 PPIP5K2O43314 1243 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CBX6O95503 412 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 NR3C1P04150 777 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 UBTFL6P0CB48 400 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 PON1P27169 355 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 PRPHP41219 470 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 RPL21P46778 160 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CETN1Q12798 172 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 TCP10Q12799 353 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 GRM4Q14833 912 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ECM1Q16610 540 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 WLSQ5T9L3 541 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 MREGQ8N565 214 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 SLC30A5Q8TAD4 765 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CCHCR1Q8TD31 782 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 PLA2G12BQ9BX93 195 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 VCXQ9H320 206 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ARL2BPQ9Y2Y0 163 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 BZW2Q9Y6E2 419 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 PASKQ96RG2 1323 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 TJP1Q07157 1748 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ENTPD5O75356 428 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 LUC7L3O95232 432 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ECEL1O95672 775 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 SLURP2P0DP57 97 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CNGA1P29973 690 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CPA2P48052 419 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 EPC2Q52LR7 807 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 CFAP157Q5JU67 520 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 LRRC8CQ8TDW0 803 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 ARHGEF26Q96DR7 871 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 RGL1Q9NZL6 768 aa11.2□□□□□ -0.62
PRPF38B-201ENST00000370021 GOLGA8IPA6NC78 632 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 GOLGA8JA6NMD2 632 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 DDX3XO00571 662 aaKnown RBP eCLIP11.19□□□□□ -0.625e-9■□□□□ 8.9
PRPF38B-201ENST00000370021 C21orf2O43822 256 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 MGRN1O60291 552 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 DNAJC8O75937 253 aaPredicted RBP11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 FERP16591 822 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 CDK8P49336 464 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms