RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 JAM2P57087 298 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ITIH3Q06033 890 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 PAK2Q13177 524 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 RASA3Q14644 834 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ZNF572Q7Z3I7 529 aaPredicted RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 BCCIPQ9P287 314 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 WNT10BO00744 389 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 KRT13P13646 458 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 BFSP1Q12934 665 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 FAM102BQ5T8I3 360 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 MSL3Q8N5Y2 521 aaKnown RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 CTNNBL1Q8WYA6 563 aaPredicted RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 PPP1R9AQ9ULJ8 1098 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ASTN2O75129 1339 aaPredicted RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 EIF3DO15371 548 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ATP9AO75110 1047 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 FGGP02679 453 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 GNGT1P63211 74 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 PDCLQ13371 301 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 MTMR1Q13613 665 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 UGCGQ16739 394 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 LRRC57Q8N9N7 239 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 POP1Q99575 1024 aaKnown RBP12.5□□□□□ -0.41
RAB39B-201ENST00000369454 STK32BQ9NY57 414 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
RAB39B-201ENST00000369454 CALCAP01258 141 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 MAPK7Q13164 816 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 NNTQ13423 1086 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 ARHGEF19Q8IW93 802 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 PGRMC1O00264 195 aaKnown RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 TTI1O43156 1089 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 ASNSP08243 561 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 PDE4CQ08493 712 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 SPP2Q13103 211 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 STK33Q9BYT3 514 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 DAPK3O43293 454 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 SLC26A4O43511 780 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 OPA1O60313 960 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 PRKCIP41743 596 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 CCT5P48643 541 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 RPS6P62753 249 aaKnown RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 MRPS9P82933 396 aaKnown RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 CXCL9Q07325 125 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 TNIP1Q15025 636 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 PPM1KQ8N3J5 372 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 CAPS2Q9BXY5 557 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 GDF3Q9NR23 364 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 AMFRQ9UKV5 643 aa12.49□□□□□ -0.41
RAB39B-201ENST00000369454 RRP15Q9Y3B9 282 aaKnown RBP12.49□□□□□ -0.41
RAB39B-201ENST00000369454 ZNF536O15090 1300 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 ZNF233A6NK53 670 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 FLT3P36888 993 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 TRAF1Q13077 416 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 PHLDB2Q86SQ0 1253 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 FAM160B2Q86V87 743 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 BACH1O14867 736 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 YWHABP31946 246 aaKnown RBP12.48□□□□□ -0.41
RAB39B-201ENST00000369454 RARRES1P49788 294 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 SETQ01105 290 aaPredicted RBP12.48□□□□□ -0.41
RAB39B-201ENST00000369454 MTMR2Q13614 643 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 UBLCP1Q8WVY7 318 aaPredicted RBP12.48□□□□□ -0.41
RAB39B-201ENST00000369454 GMLQ99445 158 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 MYO1CO00159 1063 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 ICAM1P05362 532 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
RAB39B-201ENST00000369454 IRAK1P51617 712 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 GLE1Q53GS7 698 aaKnown RBP12.48□□□□□ -0.41
RAB39B-201ENST00000369454 C10orf76Q5T2E6 689 aa12.48□□□□□ -0.41
RAB39B-201ENST00000369454 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms