RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 EBF2Q9HAK2 575 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 KCNK9Q9NPC2 374 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 BZW2Q9Y6E2 419 aaKnown RBP13.29□□□□□ -0.28
PHGDH-201ENST00000369407 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 POLD1P28340 1107 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 NUGGCQ68CJ6 796 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 KCTD1Q719H9 257 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 CENPTQ96BT3 561 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 REEP2Q9BRK0 252 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 YIPF3Q9GZM5 350 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 BAG3O95817 575 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 GH1P01241 217 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 PICALMQ13492 652 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 ITIH4Q14624 930 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 PLS1Q14651 629 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 CNGA2Q16280 664 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 NEDD1Q8NHV4 660 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 CTNNBL1Q8WYA6 563 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 AFF2P51816 1311 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 RASGRF2O14827 1237 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 SNX3O60493 162 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 GCNT3O95395 438 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 NR3C1P04150 777 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 KNOP1Q1ED39 458 aaKnown RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 ZNF746Q6NUN9 644 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 ARMC2Q8NEN0 867 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 SLC35C1Q96A29 364 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 HOOK2Q96ED9 719 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 L3MBTL3Q96JM7 780 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 DHX36Q9H2U1 1008 aaKnown RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 RIOX1Q9H6W3 641 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 SNED1Q8TER0 1413 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L10C9JJH3 530 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 NUDT17P0C025 328 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 STAT1P42224 750 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 SNAP25P60880 206 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 MAPK7Q13164 816 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 AUHQ13825 339 aaKnown RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 COG2Q14746 738 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 TRIM68Q6AZZ1 485 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 EXOC3L1Q86VI1 746 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 ADGRF4Q8IZF3 695 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 RDH13Q8NBN7 331 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 PGM2Q96G03 612 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 JMJD4Q9H9V9 463 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
PHGDH-201ENST00000369407 SRP68Q9UHB9 627 aaKnown RBP13.28□□□□□ -0.28
PHGDH-201ENST00000369407 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.28
PHGDH-201ENST00000369407 ATMINO43313 823 aaPredicted RBP13.27□□□□□ -0.28
PHGDH-201ENST00000369407 TRIM49P0CI25 452 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 TRIM49CP0CI26 452 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 PRKCIP41743 596 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 JAM2P57087 298 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 INHBEP58166 350 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 GIT2Q14161 759 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 TBC1D22AQ8WUA7 517 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 TBK1Q9UHD2 729 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 NENFQ9UMX5 172 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 ZNF652Q9Y2D9 606 aa13.27□□□□□ -0.28
PHGDH-201ENST00000369407 SLC12A3P55017 1021 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 IRX1P78414 480 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-201ENST00000369407 CATSPER3Q86XQ3 398 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 ZNF513Q8N8E2 541 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-201ENST00000369407 PRELID2Q8N945 189 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 BTBD6Q96KE9 485 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 CRAMP1Q96RY5 1269 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.29
PHGDH-201ENST00000369407 DNAJC12Q9UKB3 198 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 DCCP43146 1447 aa13.27□□□□□ -0.29
PHGDH-201ENST00000369407 TMEM120BA0PK00 339 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 KCNQ2O43526 872 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 EDRF1Q3B7T1 1238 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 FRMD5Q7Z6J6 570 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 RMDN2Q96LZ7 410 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 PWWP2AQ96N64 755 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 PSTPIP2Q9H939 334 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 KCNMB3Q9NPA1 279 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 USP15Q9Y4E8 981 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ALG6Q9Y672 507 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 RREB1Q92766 1687 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ESYT2A0FGR8 921 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 RIPK2O43353 540 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 GSTA1P08263 222 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 AKR1B1P15121 316 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 PTGIRP43119 386 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ZNF268Q14587 947 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 C6orf118Q5T5N4 469 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 THEMIS2Q5TEJ8 643 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 DPP8Q6V1X1 898 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 C16orf86Q6ZW13 317 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms