RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
PRDM1-203ENST00000369096 ERVV-2B6SEH9 535 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 KCNQ3O43525 872 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 MMP1P03956 469 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ACTN3Q08043 901 aaPredicted RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 OSBPL1AQ9BXW6 950 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ETNK1Q9HBU6 452 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ZSCAN32Q9NX65 697 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 KRT14P02533 472 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 HNRNPCP07910 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 PEX3P56589 373 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 CTTNQ14247 550 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 SLC9A5Q14940 896 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 KLHL38Q2WGJ6 581 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 USP17L2Q6R6M4 530 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 SCN4BQ8IWT1 228 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 SH3KBP1Q96B97 665 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ABHD8Q96I13 439 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 PCDHGB4Q9UN71 923 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 MIF4GDA9UHW6 222 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 KCNA2P16389 499 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 SMARCA1P28370 1054 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 UBE2SQ16763 222 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ZMYM1Q5SVZ6 1142 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 CC2D2BQ6DHV5 1058 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 LRRC31Q6UY01 552 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ICA1LQ8NDH6 482 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 OTUB1Q96FW1 271 aaPredicted RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 PALMO75781 387 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 DYNC1I2Q13409 638 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 CDC37Q16543 378 aaPredicted RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 KRT39Q6A163 491 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 PHF21AQ96BD5 680 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ADAM21Q9UKJ8 722 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 RCOR1Q9UKL0 485 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 SYNGAP1Q96PV0 1343 aa16.78■□□□□ 0.28
PRDM1-203ENST00000369096 ABCA6Q8N139 1617 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 RABGAP1LQ5R372 815 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 TSR3Q9UJK0 312 aaKnown RBP16.77■□□□□ 0.28
PRDM1-203ENST00000369096 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 KDM1AO60341 852 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 ATP1A3P13637 1013 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 THEMIS2Q5TEJ8 643 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 ELMSAN1Q6PJG2 1045 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 BTN2A2Q8WVV5 523 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 AFF4Q9UHB7 1163 aaKnown RBP16.77■□□□□ 0.28
PRDM1-203ENST00000369096 HPCAL4Q9UM19 191 aa16.77■□□□□ 0.28
PRDM1-203ENST00000369096 SFI1A8K8P3 1242 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 hCG_1984214I3L0E3 225 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 BRAFP15056 766 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 ZNF713Q8N859 430 aaPredicted RBP16.77■□□□□ 0.27
PRDM1-203ENST00000369096 MB21D1Q8N884 522 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 H0Y626 953 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 SUPT3HO75486 399 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 TRIM16O95361 564 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 SMAD1Q15797 465 aaKnown RBP16.77■□□□□ 0.27
PRDM1-203ENST00000369096 PASD1Q8IV76 773 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 DBNLQ9UJU6 430 aaKnown RBP16.77■□□□□ 0.27
PRDM1-203ENST00000369096 NEO1Q92859 1461 aa16.77■□□□□ 0.27
PRDM1-203ENST00000369096 HECW2Q9P2P5 1572 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 F5H423 210 aaPredicted RBP16.76■□□□□ 0.27
PRDM1-203ENST00000369096 MAFGO15525 162 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 MYO1DO94832 1006 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 ALCAMQ13740 583 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 SYDE2Q5VT97 1194 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 B4GALNT2Q8NHY0 566 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 RNF25Q96BH1 459 aaPredicted RBP16.76■□□□□ 0.27
PRDM1-203ENST00000369096 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 AIPL1Q9NZN9 384 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 RANBP1P43487 201 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 ICE2Q659A1 982 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 OR6P1Q8NGX9 317 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 ASIC4Q96FT7 647 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 XDHP47989 1333 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 DMC1Q14565 340 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 HIF1AQ16665 826 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 RNF135Q8IUD6 432 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 PCDHB6Q9Y5E3 794 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 MFAP3LO75121 409 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 WDR47O94967 919 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 ASNSD1Q9NWL6 643 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 USP21Q9UK80 565 aa16.76■□□□□ 0.27
PRDM1-203ENST00000369096 CFAP69A5D8W1 941 aa16.75■□□□□ 0.27
PRDM1-203ENST00000369096 GFAPP14136 432 aa16.75■□□□□ 0.27
PRDM1-203ENST00000369096 PRAMEP78395 509 aa16.75■□□□□ 0.27
PRDM1-203ENST00000369096 LRRC8EQ6NSJ5 796 aa16.75■□□□□ 0.27
PRDM1-203ENST00000369096 RFX8Q6ZV50 586 aa16.75■□□□□ 0.27
PRDM1-203ENST00000369096 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms