RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ASGR1P07306 291 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 GLRA2P23416 452 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 SOX10P56693 466 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 STX17P56962 302 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 KCNA10Q16322 511 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 LHX8Q68G74 356 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 CCSAPQ6IQ19 270 aaPredicted RBP13.56□□□□□ -0.24
TUBE1-202ENST00000368662 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 NOC3LQ8WTT2 800 aaKnown RBP13.56□□□□□ -0.24
TUBE1-202ENST00000368662 TRAPPC12Q8WVT3 735 aa13.56□□□□□ -0.24
TUBE1-202ENST00000368662 PRPF31Q8WWY3 499 aaKnown RBP13.56□□□□□ -0.24
TUBE1-202ENST00000368662 SUCLA2Q9P2R7 463 aaPredicted RBP13.56□□□□□ -0.24
TUBE1-202ENST00000368662 C17orf102A2RUQ5 167 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 CHMP4BP1P59074 171 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 TFDP1Q14186 410 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 MARCH8Q5T0T0 291 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 TTI2Q6NXR4 508 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 NFRKBQ6P4R8 1299 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 TMEM161BQ8NDZ6 487 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 GOLGA5Q8TBA6 731 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 LMBR1Q8WVP7 490 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 ANP32BQ92688 251 aaKnown RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 MED15Q96RN5 788 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 MAP7D2Q96T17 732 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 KCTD10Q9H3F6 313 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 SEMA6BQ9H3T3 888 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 SETD4Q9NVD3 440 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 ARHGAP28Q9P2N2 729 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 EXOC7Q9UPT5 735 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 MBLAC1A4D2B0 266 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 SLC16A4O15374 487 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 PRPF6O94906 941 aaKnown RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 HOXC8P31273 242 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 SNRPFP62306 86 aaKnown RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 EDRF1Q3B7T1 1238 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 ANKRD40Q6AI12 368 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 FBXO46Q6PJ61 603 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 CSGALNACT2Q8N6G5 542 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 DEPTORQ8TB45 409 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 ASAP3Q8TDY4 903 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 BSNDQ8WZ55 320 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 TYW1Q9NV66 732 aaKnown RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
TUBE1-202ENST00000368662 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 KAT6AQ92794 2004 aa13.55□□□□□ -0.24
TUBE1-202ENST00000368662 TRIM49BA6NDI0 452 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 LRRIQ4A6NIV6 560 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
TUBE1-202ENST00000368662 HSPA1AP0DMV8 641 aaKnown RBP13.54□□□□□ -0.24
TUBE1-202ENST00000368662 HSPA1BP0DMV9 641 aaKnown RBP13.54□□□□□ -0.24
TUBE1-202ENST00000368662 EFNA5P52803 228 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 PMS1P54277 932 aaKnown RBP13.54□□□□□ -0.24
TUBE1-202ENST00000368662 POU5F1BQ06416 359 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 LAMTOR4Q0VGL1 99 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 ZCWPW2Q504Y3 356 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
TUBE1-202ENST00000368662 HS2ST1Q7LGA3 356 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 ZNF710Q8N1W2 664 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 GBP3Q9H0R5 595 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 THAP9Q9H5L6 903 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 SCN10AQ9Y5Y9 1956 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 DENND3A2RUS2 1198 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 CLCN3P51790 818 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 LBX1P52954 281 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 ACLYP53396 1101 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 ADAM17P78536 824 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
TUBE1-202ENST00000368662 SPAG1Q07617 926 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 DRP2Q13474 957 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 CAPSQ13938 189 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 RHPN2Q8IUC4 686 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 MAP4K3Q8IVH8 894 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 FAM114A1Q8IWE2 563 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 NFKBIZQ9BYH8 718 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 UNC93B1Q9H1C4 597 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 HDAC6Q9UBN7 1215 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 TBX20Q9UMR3 447 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 AKT3Q9Y243 479 aa13.54□□□□□ -0.24
TUBE1-202ENST00000368662 RPLP2P05387 115 aaKnown RBP13.53□□□□□ -0.24
TUBE1-202ENST00000368662 ZNF18P17022 549 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
TUBE1-202ENST00000368662 RPL13P26373 211 aaKnown RBP13.53□□□□□ -0.24
TUBE1-202ENST00000368662 HOXD13P35453 343 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 STRN3Q13033 797 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 NFIL3Q16649 462 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms