RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CEP55Q53EZ4 464 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 TBC1D1Q86TI0 1168 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 CNOT10Q9H9A5 744 aaKnown RBP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 ATP6V0A4Q9HBG4 840 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 FBXO40Q9UH90 709 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 NFU1Q9UMS0 254 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 PXDNQ92626 1479 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 MEFVO15553 781 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 KRT1P04264 644 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 MARK3P27448 753 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 SLC12A2P55011 1212 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 CDC42EP5Q6NZY7 148 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 HHIPL2Q6UWX4 724 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 TXLNGQ9NUQ3 528 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 MED7O43513 233 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 SFNP31947 248 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 GLE1Q53GS7 698 aaKnown RBP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 CYP4F22Q6NT55 531 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 LDHDQ86WU2 507 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 YWHAGP61981 247 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 SUGP1Q8IWZ8 645 aaKnown RBP14.22□□□□□ -0.13
PTPRK-204ENST00000368210 CCT6BQ92526 530 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 RILPQ96NA2 401 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 WDR24Q96S15 920 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 RPS6KC1Q96S38 1066 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 C7orf25Q9BPX7 421 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 NYAP2Q9P242 653 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 MAD1L1Q9Y6D9 718 aa14.22□□□□□ -0.13
PTPRK-204ENST00000368210 CRCPO75575 148 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 LMNAP02545 664 aaKnown RBP14.21□□□□□ -0.13
PTPRK-204ENST00000368210 CUL1Q13616 776 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 CFAP61Q8NHU2 1237 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 KIAA1586Q9HCI6 787 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 ETAA1Q9NY74 926 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 ADGRB2O60241 1585 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 SLIT1O75093 1534 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 SYNJ2BP-COX16A0A087WUM0 186 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 EYA4O95677 639 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 GRIN1Q05586 938 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 STK4Q13043 487 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 NLRP7Q8WX94 980 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 FAM167BQ9BTA0 163 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 ZMYND12Q9H0C1 365 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 COX16Q9P0S2 106 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 DENND3A2RUS2 1198 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 MIF4GDA9UHW6 222 aaKnown RBP14.21□□□□□ -0.13
PTPRK-204ENST00000368210 KLRK1P26718 216 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 TMEM60Q9H2L4 133 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 RGL1Q9NZL6 768 aa14.21□□□□□ -0.13
PTPRK-204ENST00000368210 MROH1Q8NDA8 1641 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 HMGB1P1B2RPK0 211 aaPredicted RBP14.21□□□□□ -0.14
PTPRK-204ENST00000368210 SPECC1L-ADORA2AF8WAN1 911 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 GIPC1O14908 333 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 FGFR2P21802 821 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 CASP7P55210 303 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 LAMB3Q13751 1172 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 NR1I3Q14994 352 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 EPHA7Q15375 998 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 APLFQ8IW19 511 aaPredicted RBP14.21□□□□□ -0.14
PTPRK-204ENST00000368210 AFAP1L2Q8N4X5 818 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 CEP70Q8NHQ1 597 aa14.21□□□□□ -0.14
PTPRK-204ENST00000368210 CLDN3O15551 220 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 PPP4CP60510 307 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 DRAP1Q14919 205 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-204ENST00000368210 THNSL1Q8IYQ7 743 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 ZBTB10Q96DT7 871 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 RPF1Q9H9Y2 349 aaKnown RBP14.2□□□□□ -0.14
PTPRK-204ENST00000368210 ZNF711Q9Y462 761 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 VAMP7P51809 220 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 PSMC5P62195 406 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 LRRC43Q8N309 656 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 THOC1Q96FV9 657 aaKnown RBP14.2□□□□□ -0.14
PTPRK-204ENST00000368210 OLFM3Q96PB7 478 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 IRX2Q9BZI1 471 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-204ENST00000368210 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 CFAP73A6NFT4 308 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 FDX1P10109 184 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 PHEXP78562 749 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 CHP1Q99653 195 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 OSBPL1AQ9BXW6 950 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 AP5M1Q9H0R1 490 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 HDAC6Q9UBN7 1215 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 GABBR1Q9UBS5 961 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 CNOT8Q9UFF9 292 aaKnown RBP14.2□□□□□ -0.14
PTPRK-204ENST00000368210 CD2APQ9Y5K6 639 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 FXR1P51114 621 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTPRK-204ENST00000368210 DYNLT1P63172 113 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 GPC5P78333 572 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 PTPAQ15257 358 aa14.2□□□□□ -0.14
PTPRK-204ENST00000368210 FAM133BQ5BKY9 247 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms