RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 LGALS2P05162 132 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 MAPTP10636 758 aaKnown RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 CDC25BP30305 580 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 ARL2P36404 184 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 FLT3LGP49771 235 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 RTP1P59025 263 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 TNFAIP2Q03169 654 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 PRKCZQ05513 592 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 ZC2HC1CQ53FD0 456 aaPredicted RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 ODR4Q5SWX8 454 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 TRIB2Q92519 343 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 LENG1Q96BZ8 264 aaPredicted RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 C16orf70Q9BSU1 422 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 TRIM5Q9C035 493 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 XPO4Q9C0E2 1151 aaKnown RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 IKZF4Q9H2S9 585 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 RNPEPQ9H4A4 650 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 ST6GALNAC4Q9H4F1 302 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 THAP9Q9H5L6 903 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 MRPL44Q9H9J2 332 aaKnown RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 CDHR5Q9HBB8 845 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 NRBP2Q9NSY0 501 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 IFNKQ9P0W0 207 aa10.48□□□□□ -0.73
VTA1-201ENST00000367621 LIMA1Q9UHB6 759 aaKnown RBP10.48□□□□□ -0.73
VTA1-201ENST00000367621 A0A1B0GTH6 734 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 BICDL2A1A5D9 508 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 A6NJR5 290 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NOP56O00567 594 aaKnown RBP10.47□□□□□ -0.73
VTA1-201ENST00000367621 EIF3DO15371 548 aaKnown RBP eCLIP10.47□□□□□ -0.73
VTA1-201ENST00000367621 RNF40O75150 1001 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 PPFIA4O75335 1185 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 MAFO75444 373 aaPredicted RBP10.47□□□□□ -0.73
VTA1-201ENST00000367621 MMP3P08254 477 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 CYBAP13498 195 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 FECHP22830 423 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 MARK3P27448 753 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NPTX2P47972 431 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 SLC26A2P50443 739 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NCKAP1LP55160 1127 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 TPM4P67936 248 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 TRIM32Q13049 653 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NR1I3Q14994 352 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 EMC2Q15006 297 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 KRT31Q15323 416 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 KNOP1Q1ED39 458 aaKnown RBP10.47□□□□□ -0.73
VTA1-201ENST00000367621 MTERF2Q49AM1 385 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 TCP11X2Q5H9J9 407 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 FAM102BQ5T8I3 360 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 KSR1Q8IVT5 923 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NELFCDQ8IXH7 590 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 ASAP3Q8TDY4 903 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 SPIRE2Q8WWL2 714 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 GLG1Q92896 1179 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 KCNN1Q92952 543 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 FAM167AQ96KS9 214 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 DRC1Q96MC2 740 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NTPCRQ9BSD7 190 aaKnown RBP10.47□□□□□ -0.73
VTA1-201ENST00000367621 SMARCAD1Q9H4L7 1026 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 AZI2Q9H6S1 392 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 ATP6V0A4Q9HBG4 840 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 NPDC1Q9NQX5 325 aaPredicted RBP10.47□□□□□ -0.73
VTA1-201ENST00000367621 NRBP1Q9UHY1 535 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 TRAF3IP3Q9Y228 551 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 ZMYM2Q9UBW7 1377 aa10.47□□□□□ -0.73
VTA1-201ENST00000367621 KCNJ18B7U540 433 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 GPR25O00155 361 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 PDXKO00764 312 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 DYNC1LI2O43237 492 aaPredicted RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 GCNT3O95395 438 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 PBX1P40424 430 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 RFC5P40937 340 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 GTF2BQ00403 316 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 KCNJ12Q14500 433 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 SWT1Q5T5J6 900 aaKnown RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 FAM178BQ8IXR5 827 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 TMEM161BQ8NDZ6 487 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 OR6J1Q8NGC5 347 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 CD99L2Q8TCZ2 262 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 NOC3LQ8WTT2 800 aaKnown RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 ANP32BQ92688 251 aaKnown RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 KAT2BQ92831 832 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 KIFAP3Q92845 792 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 POLR3FQ9H1D9 316 aaPredicted RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 LARSQ9P2J5 1176 aaKnown RBP10.46□□□□□ -0.73
VTA1-201ENST00000367621 SRRDQ9UH36 339 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 Q9Y3F1 56 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 PPME1Q9Y570 386 aa10.46□□□□□ -0.73
VTA1-201ENST00000367621 ZNFX1Q9P2E3 1918 aaKnown RBP10.46□□□□□ -0.74
VTA1-201ENST00000367621 KIAA1217Q5T5P2 1943 aa10.45□□□□□ -0.74
VTA1-201ENST00000367621 UBE4BO95155 1302 aa10.45□□□□□ -0.74
VTA1-201ENST00000367621 ADGRA3Q8IWK6 1321 aa10.45□□□□□ -0.74
VTA1-201ENST00000367621 SLC16A4O15374 487 aa10.45□□□□□ -0.74
VTA1-201ENST00000367621 TEX33O43247 280 aa10.45□□□□□ -0.74
VTA1-201ENST00000367621 HBP1O60381 514 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms