RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 ARL4CP56559 192 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 JADE1Q6IE81 842 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SRBD1Q8N5C6 995 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TTC1Q99614 292 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 DBNDD1Q9H9R9 158 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 DDX56Q9NY93 547 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SLC13A4Q9UKG4 626 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SUFUQ9UMX1 484 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ADAMTS13Q76LX8 1427 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 FAM95CA0A1B0GW59 222 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 HSPA8P11142 646 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 EPHB1P54762 984 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SNRPFP62306 86 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 UBXN2AP68543 259 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ERICH1Q86X53 443 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 DAGLBQ8NCG7 672 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 GRAMD1AQ96CP6 724 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TACO1Q9BSH4 297 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 MSTO1Q9BUK6 570 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TRIM9Q9C026 710 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TMEM60Q9H2L4 133 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SNX25Q9H3E2 840 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 EPS15L1Q9UBC2 864 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SRP68Q9UHB9 627 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 E9PMD0 336 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 MYO1CO00159 1063 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 HOXD10P28358 340 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SOX5P35711 763 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SCARF1Q14162 830 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TFDP2Q14188 446 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SLC27A3Q5K4L6 730 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 RAB44Q7Z6P3 723 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 YAF2Q8IY57 180 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 PGBD3Q8N328 593 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 TMEM35BQ8NCS4 154 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 MMEP08473 750 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SAT1P21673 171 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 INPP1P49441 399 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ANTXR2P58335 489 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 EPHA7Q15375 998 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 NYAP1Q6ZVC0 841 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 SP8Q8IXZ3 490 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ADGRF4Q8IZF3 695 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 HDAC11Q96DB2 347 aa9.64□□□□□ -0.87
SYNE1-205ENST00000367251 CNOT8Q9UFF9 292 aaKnown RBP9.64□□□□□ -0.87
SYNE1-205ENST00000367251 K7ERI5 159 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 OCM2P0CE71 109 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 SLC1A1P43005 524 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 VAMP7P51809 220 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 EDRF1Q3B7T1 1238 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 FBXL16Q8N461 479 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 MCUQ8NE86 351 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 PYROXD1Q8WU10 500 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 HNRNPLLQ8WVV9 542 aaKnown RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 NLRP7Q8WX94 980 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 RPF1Q9H9Y2 349 aaKnown RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 SRGAP2O75044 1071 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 KRT37O76014 449 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 PLS3P13797 630 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 ZNF18P17022 549 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 ANKRD40Q6AI12 368 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 CYP4F22Q6NT55 531 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 CAPN12Q6ZSI9 719 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 CELF1Q92879 486 aaKnown RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 FAM129AQ9BZQ8 928 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 CLRN2A0PK11 232 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 CFAP73A6NFT4 308 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 SKIP12755 728 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 MTMR1Q13613 665 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 NXNQ6DKJ4 435 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 IP6K2Q9UHH9 426 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 ZRANB2O95218 330 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 BAG2O95816 211 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 ATP1A1P05023 1023 aaKnown RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 FDPSP14324 419 aaKnown RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 GCKP35557 465 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 SPATA4Q8NEY3 305 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 DPF2Q92785 391 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 PPCSQ9HAB8 311 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 HERC5Q9UII4 1024 aaKnown RBP9.63□□□□□ -0.87
SYNE1-205ENST00000367251 SALL3Q9BXA9 1300 aa9.63□□□□□ -0.87
SYNE1-205ENST00000367251 USP17L10C9JJH3 530 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 NMT2O60551 498 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SCP2P22307 547 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 CASP1P29466 404 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 HOXA13P31271 388 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 ECE1P42892 770 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 PEX3P56589 373 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 KYAT1Q16773 422 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 TC2NQ8N9U0 490 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 WDR24Q96S15 920 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SERPINI1Q99574 410 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms