RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 SLC35C1Q96A29 364 aa16.39■□□□□ 0.21
NEK2-201ENST00000366998 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
NEK2-201ENST00000366998 NIFKQ9BYG3 293 aaKnown RBP16.39■□□□□ 0.21
NEK2-201ENST00000366998 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
NEK2-201ENST00000366998 CEP72Q9P209 647 aa16.39■□□□□ 0.21
NEK2-201ENST00000366998 LRRC53A6NM62 1247 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 MARK3P27448 753 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 RTP1P59025 263 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 KIF18AQ8NI77 898 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 FAM167AQ96KS9 214 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 CBWD1Q9BRT8 395 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
NEK2-201ENST00000366998 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
NEK2-201ENST00000366998 NDUFA10O95299 355 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 KRT13P13646 458 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 POLR2FP61218 127 aaKnown RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 EXOC3L4Q17RC7 722 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 TMEM63BQ5T3F8 832 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 PDXDC1Q6P996 788 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 GBP6Q6ZN66 633 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 PLEKHH3Q7Z736 793 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 TRIM50Q86XT4 487 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 MAP4K3Q8IVH8 894 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 BAP1Q92560 729 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 DHX33Q9H6R0 707 aaKnown RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 HSPBP1Q9NZL4 362 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 PAXBP1Q9Y5B6 917 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 NOL4O94818 638 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 TUBB4AP04350 444 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 MAPK4P31152 587 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 RFC5P40937 340 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 APBA1Q02410 837 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 C12orf56Q8IXR9 622 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 XXYLT1Q8NBI6 393 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 NTPCRQ9BSD7 190 aaKnown RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 VTA1Q9NP79 307 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 LZTFL1Q9NQ48 299 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 PLAGL2Q9UPG8 496 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
NEK2-201ENST00000366998 ADGRA3Q8IWK6 1321 aa16.37■□□□□ 0.21
NEK2-201ENST00000366998 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
NEK2-201ENST00000366998 H0YCG3 227 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 LGR5O75473 907 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 SLC9A1P19634 815 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 ETF1P62495 437 aaKnown RBP16.36■□□□□ 0.21
NEK2-201ENST00000366998 BFSP1Q12934 665 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 GRB14Q14449 540 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 PPP2R5AQ15172 486 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 BICD1Q96G01 975 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 GANQ9H2C0 597 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
NEK2-201ENST00000366998 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.36■□□□□ 0.21
NEK2-201ENST00000366998 GCNT4Q9P109 453 aa16.36■□□□□ 0.21
NEK2-201ENST00000366998 ANKRD63C9JTQ0 380 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 ACTN1P12814 892 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 TERF1P54274 439 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 CDK17Q00537 523 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 TARBP2Q15633 366 aaKnown RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 ZNF467Q7Z7K2 595 aaPredicted RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 ASAP3Q8TDY4 903 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 DNAI1Q9UI46 699 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 KCNG1Q9UIX4 513 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 EMSYQ7Z589 1322 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 UQCRHLA0A096LP55 91 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 A0A0U1RQJ8 604 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 LRRIQ4A6NIV6 560 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
NEK2-201ENST00000366998 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 UQCRHP07919 91 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 PON1P27169 355 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 FMO5P49326 533 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 TAF1CQ15572 869 aaPredicted RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 ARHGAP29Q52LW3 1261 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 GJC2Q5T442 439 aaPredicted RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 TAPT1Q6NXT6 567 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 INTS8Q75QN2 995 aaKnown RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 PLPPR4Q7Z2D5 763 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 CCDC170Q8IYT3 715 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 DEPTORQ8TB45 409 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 ATRIPQ8WXE1 791 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 CEP89Q96ST8 783 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 NUCKS1Q9H1E3 243 aaKnown RBP16.35■□□□□ 0.21
NEK2-201ENST00000366998 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 ARHGAP28Q9P2N2 729 aa16.35■□□□□ 0.21
NEK2-201ENST00000366998 SIP14410 1827 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms