RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PTCHD1Q96NR3 888 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 CLUHP3Q96NS8 147 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 PUS3Q9BZE2 481 aaKnown RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 CD209Q9NNX6 404 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 CNNM1Q9NRU3 951 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 ERVK13-1Q9NX77 482 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 LMCD1Q9NZU5 365 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 NDOR1Q9UHB4 597 aa9.53□□□□□ -0.88
YBX3-204ENST00000366290 TMEFF2Q9UIK5 374 aaPredicted RBP9.53□□□□□ -0.88
YBX3-204ENST00000366290 SNAP23O00161 211 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 PAMP19021 973 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 FKBP1AP62942 108 aaKnown RBP9.52□□□□□ -0.89
YBX3-204ENST00000366290 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.89
YBX3-204ENST00000366290 MTX1Q13505 466 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 TESK1Q15569 626 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 DLK2Q6UY11 383 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 SAPCD2Q86UD0 394 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 ITPRIPQ8IWB1 547 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 DCAF4Q8WV16 495 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 FCRL2Q96LA5 508 aaPredicted RBP9.52□□□□□ -0.89
YBX3-204ENST00000366290 CCDC39Q9UFE4 941 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 ABT1Q9ULW3 272 aaKnown RBP9.52□□□□□ -0.89
YBX3-204ENST00000366290 PRKAB1Q9Y478 270 aa9.52□□□□□ -0.89
YBX3-204ENST00000366290 NPHP3-ACAD11A0A0J9YXS1 232 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 ARNTLO00327 626 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 CIAO1O76071 339 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 SASH1O94885 1247 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 PDE8BO95263 885 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 GNAI3P08754 354 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 ZP2Q05996 745 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 LRRC24Q50LG9 513 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 TTLL5Q6EMB2 1281 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 CYP2R1Q6VVX0 501 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 MAMDC2Q7Z304 686 aaPredicted RBP9.51□□□□□ -0.89
YBX3-204ENST00000366290 ZNF804AQ7Z570 1209 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 CCDC103Q8IW40 242 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 SLC7A14Q8TBB6 771 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 FAM84BQ96KN1 310 aaPredicted RBP9.51□□□□□ -0.89
YBX3-204ENST00000366290 MYOZ2Q9NPC6 264 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 LRRFIP2Q9Y608 721 aaKnown RBP9.51□□□□□ -0.89
YBX3-204ENST00000366290 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 ARAP2Q8WZ64 1704 aa9.51□□□□□ -0.89
YBX3-204ENST00000366290 ECM29Q5VYK3 1845 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 TRBV23OR9-2A0A075B6M9 112 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 EYA2O00167 538 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 EFCAB14O75071 495 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 FGFR2P21802 821 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 LTBRP36941 435 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 RGS19P49795 217 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 KCNAB2Q13303 367 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 TBC1D10BQ4KMP7 808 aaPredicted RBP9.5□□□□□ -0.89
YBX3-204ENST00000366290 RNF187Q5TA31 235 aaPredicted RBP9.5□□□□□ -0.89
YBX3-204ENST00000366290 MCTP1Q6DN14 999 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 KCNT2Q6UVM3 1135 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 ATG9AQ7Z3C6 839 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 DHX37Q8IY37 1157 aaKnown RBP9.5□□□□□ -0.89
YBX3-204ENST00000366290 GSTCDQ8NEC7 633 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 TDRD7Q8NHU6 1098 aaKnown RBP9.5□□□□□ -0.89
YBX3-204ENST00000366290 DIO2Q92813 273 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 ZBED3Q96IU2 234 aaPredicted RBP9.5□□□□□ -0.89
YBX3-204ENST00000366290 HHIPL1Q96JK4 782 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 MMP19Q99542 508 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 PHF20Q9BVI0 1012 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 GLIS2Q9BZE0 524 aaPredicted RBP9.5□□□□□ -0.89
YBX3-204ENST00000366290 ZBTB40Q9NUA8 1239 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 DDX19BQ9UMR2 479 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 TRAF6Q9Y4K3 522 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 NPFFR2Q9Y5X5 522 aa9.5□□□□□ -0.89
YBX3-204ENST00000366290 TBC1D8O95759 1140 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 NCLP19338 710 aaKnown RBP9.49□□□□□ -0.89
YBX3-204ENST00000366290 MAP2K2P36507 400 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 LAPTM5Q13571 262 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 PUM3Q15397 648 aaKnown RBP9.49□□□□□ -0.89
YBX3-204ENST00000366290 KRT26Q7Z3Y9 468 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 BRAPQ7Z569 592 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 CPNE8Q86YQ8 564 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 CERS5Q8N5B7 392 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 TMEM52Q8NDY8 209 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 KLHDC4Q8TBB5 520 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 MFSD3Q96ES6 412 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 ALPK1Q96QP1 1244 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 G6PC3Q9BUM1 346 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 MXD3Q9BW11 206 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 TRIM39Q9HCM9 518 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 SLAMF8Q9P0V8 285 aa9.49□□□□□ -0.89
YBX3-204ENST00000366290 TNRC18O15417 2968 aaPredicted RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 WNT10BO00744 389 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 CELF2O95319 508 aaKnown RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 GNAI2P04899 355 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 HIBADHP31937 336 aaKnown RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 IL15P40933 162 aaPredicted RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 ECE1P42892 770 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 RALGPS1Q5JS13 557 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 METTL24Q5JXM2 366 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 IQCEQ6IPM2 695 aa9.48□□□□□ -0.89
YBX3-204ENST00000366290 RSPO2Q6UXX9 243 aaPredicted RBP9.48□□□□□ -0.89
YBX3-204ENST00000366290 FILIP1Q7Z7B0 1213 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms