RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 AKR1B1P15121 316 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
EPHB4-202ENST00000360620 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 PHLDB2Q86SQ0 1253 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 CD302Q8IX05 232 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 SAAL1Q96ER3 474 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
EPHB4-202ENST00000360620 YIPF3Q9GZM5 350 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
EPHB4-202ENST00000360620 EXOC1LA0A1B0GW35 172 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 MYBP10242 640 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
EPHB4-202ENST00000360620 SP4Q02446 784 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 KAZNQ674X7 775 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 LRRC55Q6ZSA7 311 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 SYNCQ9H7C4 482 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 OSGEPQ9NPF4 335 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 GRIN2DO15399 1336 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 SCP2P22307 547 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 CA4P22748 312 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 ANXA13P27216 316 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 MAN1A1P33908 653 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 KCNJ1P48048 391 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 CAPRIN2Q6IMN6 1127 aaKnown RBP12.89□□□□□ -0.35
EPHB4-202ENST00000360620 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 CARD9Q9H257 536 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 AIPL1Q9NZN9 384 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 AGTPBP1Q9UPW5 1226 aa12.89□□□□□ -0.35
EPHB4-202ENST00000360620 RASA4BC9J798 803 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 RASA4O43374 803 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 CYP11B2P19099 503 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 PON1P27169 355 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 GCLMP48507 274 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.355e-7■■■■■ 27
EPHB4-202ENST00000360620 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 FAM129AQ9BZQ8 928 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 INTS2Q9H0H0 1204 aaKnown RBP12.88□□□□□ -0.35
EPHB4-202ENST00000360620 EXOC7Q9UPT5 735 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
EPHB4-202ENST00000360620 PDE6BP35913 854 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 DCUN1D2Q6PH85 259 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 SPATA21Q7Z572 469 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
EPHB4-202ENST00000360620 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 DONSONQ9NYP3 566 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 NID2Q14112 1375 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 MFAP3P55082 362 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 RBBP5Q15291 538 aaKnown RBP12.88□□□□□ -0.35
EPHB4-202ENST00000360620 MIER3Q7Z3K6 550 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 TAB3Q8N5C8 712 aaPredicted RBP12.88□□□□□ -0.35
EPHB4-202ENST00000360620 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 NT5C1BQ96P26 610 aa12.88□□□□□ -0.35
EPHB4-202ENST00000360620 MYH8P13535 1937 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 TMEM120BA0PK00 339 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 IGF2BP3O00425 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 PHF2O75151 1096 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 MAPK7Q13164 816 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 DDX23Q9BUQ8 820 aaKnown RBP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 STK33Q9BYT3 514 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 RGL1Q9NZL6 768 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 ARL2BPQ9Y2Y0 163 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 NSFP46459 744 aaKnown RBP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 ARHGAP24Q8N264 748 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 EPS8L3Q8TE67 593 aaKnown RBP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
EPHB4-202ENST00000360620 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
EPHB4-202ENST00000360620 CIB2O75838 187 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
EPHB4-202ENST00000360620 CASP4P49662 377 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 ZNF543Q08ER8 600 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 AP3B2Q13367 1082 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 TXNRD3Q86VQ6 643 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
EPHB4-202ENST00000360620 HEMGNQ9BXL5 484 aa12.86□□□□□ -0.35
EPHB4-202ENST00000360620 KDM4CQ9H3R0 1056 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms