RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 APLFQ8IW19 511 aaPredicted RBP14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 SCG3Q8WXD2 468 aaKnown RBP14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 MTBPQ96DY7 904 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 SGSM3Q96HU1 749 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 GJB4Q9NTQ9 266 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 PNMA2Q9UL42 364 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 KDM5DQ9BY66 1539 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 FAM107AO95990 144 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 PAPOLAP51003 745 aaKnown RBP14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 UBE3AQ05086 875 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 MAPRE2Q15555 327 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 CCDC24Q8N4L8 307 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 EME1Q96AY2 570 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 CCT7Q99832 543 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 ABCC2Q92887 1545 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 PAMP19021 973 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 BTDP43251 543 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 GPATCH4Q5T3I0 446 aaKnown RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF564Q8TBZ8 553 aaPredicted RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 GOLGA8IPA6NC78 632 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 GOLGA8JA6NMD2 632 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 hCG_1984214I3L0E3 225 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 MAP3K10Q02779 954 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 TFDP1Q14186 410 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 PROM2Q8N271 834 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF713Q8N859 430 aaPredicted RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 C7orf31Q8N865 590 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 RANBP17Q9H2T7 1088 aaKnown RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 ZDHHC9Q9Y397 364 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 COPG1Q9Y678 874 aaKnown RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 UHRF1BP1LA0JNW5 1464 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 GTF2IP78347 998 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 AGBL2Q5U5Z8 902 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 SIRT2Q8IXJ6 389 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 ASPSCR1Q9BZE9 553 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 CCDC87Q9NVE4 849 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 C16orf96A6NNT2 1141 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 VHLP40337 213 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 RPS8P62241 208 aaKnown RBP14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 TFDP2Q14188 446 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 NUP85Q9BW27 656 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 ABCF3Q9NUQ8 709 aa14.26□□□□□ -0.13
CCDC144A-203ENST00000360495 XPO1O14980 1071 aaKnown RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 ADD2P35612 726 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PTGISQ16647 500 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PPP6R3Q5H9R7 873 aaPredicted RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PUS3Q9BZE2 481 aaKnown RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 NGRNQ9NPE2 291 aaKnown RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SMG5Q9UPR3 1016 aaKnown RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 MAGEA13PA6NCF6 341 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SCP2P22307 547 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 LIFRP42702 1097 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SCARA5Q6ZMJ2 495 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SLC7A3Q8WY07 619 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 OSBP2Q969R2 916 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 LIMA1Q9UHB6 759 aaKnown RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 CHMP2BQ9UQN3 213 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PYGLP06737 847 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 ZNF18P17022 549 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 IFNA8P32881 189 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 DEFA1P59665 94 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 DEFA3P59666 94 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 INPP5AQ14642 412 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 TSSK1BQ9BXA7 367 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SEPT3Q9UH03 358 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PTPRTO14522 1441 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PJA2O43164 708 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 GGPS1O95749 300 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 ACADSP16219 412 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 KCNA1Q09470 495 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 FAM160B1Q5W0V3 765 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 AGR3Q8TD06 166 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 DPF2Q92785 391 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 THTPAQ9BU02 230 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 TMEM247A6NEH6 219 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 CIAO1O76071 339 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 KRT17Q04695 432 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 KCNH2Q12809 1159 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 TRIM16LQ309B1 348 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 ZBTB38Q8NAP3 1195 aaPredicted RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 IL17REQ8NFR9 667 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 OR2W6PQ8NHA6 318 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 C1orf54Q8WWF1 131 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 COA7Q96BR5 231 aa14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 PUS7LQ9H0K6 701 aaKnown RBP14.25□□□□□ -0.13
CCDC144A-203ENST00000360495 GALNT4Q8N4A0 578 aa14.24□□□□□ -0.13
CCDC144A-203ENST00000360495 EDEM3Q9BZQ6 932 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms