RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MYH6P13533 1939 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 SLC16A2P36021 539 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 TJP2Q9UDY2 1190 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 COPEO14579 308 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 FGGP02679 453 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 WNT8AQ9H1J5 351 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 TBC1D22BQ9NU19 505 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 SEC24BO95487 1268 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 APOA4P06727 396 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 MYL3P08590 195 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 PLCG1P19174 1290 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 CASP14P31944 242 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
CUX1-203ENST00000360264 PFASO15067 1338 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 RASSF10A6NK89 507 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 NEMP1O14524 444 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 NBPF9Q3BBW0 867 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 MFN1Q8IWA4 741 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 ZBTB9Q96C00 473 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 ZFP69BQ9UJL9 534 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 PCYT1AP49585 367 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 EEPD1Q7L9B9 569 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 LIG3P49916 1009 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 TWF2Q6IBS0 349 aaKnown RBP10.3□□□□□ -0.76
CUX1-203ENST00000360264 HSPH1Q92598 858 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 CLIC2O15247 247 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 GGPS1O95749 300 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 NR3C1P04150 777 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 HSD17B4P51659 736 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 SCARA5Q6ZMJ2 495 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 TSPAN17Q96FV3 270 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 CFLARO15519 480 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 SUPT3HO75486 399 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 FCER1AP12319 257 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 DDIT3P35638 169 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 SERPINB10P48595 397 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 OCA2Q04671 838 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 LBRQ14739 615 aaKnown RBP10.3□□□□□ -0.76
CUX1-203ENST00000360264 MB21D1Q8N884 522 aa10.3□□□□□ -0.76
CUX1-203ENST00000360264 BNIP3LO60238 219 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 E2F5Q15329 346 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 YAF2Q8IY57 180 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 TNIP2Q8NFZ5 429 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 GTF3C2Q8WUA4 911 aaPredicted RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 CCDC78A2IDD5 438 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 ENOSF1Q7L5Y1 443 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 EGFL8Q99944 293 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 EFCAB6Q5THR3 1501 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 GPC3P51654 580 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 C2orf54Q08AI8 447 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 EAF2Q96CJ1 260 aaPredicted RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 MYCBPQ99417 103 aaPredicted RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 ANAPC7Q9UJX3 599 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 FIS1Q9Y3D6 152 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 KRT72Q14CN4 511 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 STXBP2Q15833 593 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 SPATA33Q96N06 139 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 MTIF3Q9H2K0 278 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 A0A087WUV0 522 aaPredicted RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 M0QYV0 167 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 NSUN2Q08J23 767 aaKnown RBP eCLIP10.29□□□□□ -0.76
CUX1-203ENST00000360264 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 CDKL3Q8IVW4 592 aaPredicted RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 FAM32AQ9Y421 112 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 IGSF3O75054 1194 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 PKN3Q6P5Z2 889 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 HOMEZQ8IX15 550 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 DOPEY2Q9Y3R5 2298 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 CCDC15Q0P6D6 951 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 XXYLT1Q8NBI6 393 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 LSG1Q9H089 658 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 MAN1B1Q9UKM7 699 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 LGALS16A8MUM7 142 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 C16orf87Q6PH81 154 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 SYT2Q8N9I0 419 aaPredicted RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 TADA1Q96BN2 335 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 GSNP06396 782 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 MAP4P27816 1152 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 ASAP3Q8TDY4 903 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 AFG1LQ8WV93 481 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 RMDN3Q96TC7 470 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 CDC42BPGQ6DT37 1551 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 SYNMO15061 1565 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 DNAJC6O75061 913 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 KRT16P08779 473 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 CDO1Q16878 200 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 LINC00301Q8NCQ3 95 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 PBXIP1Q96AQ6 731 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 NLRP4Q96MN2 994 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 EXT2Q93063 718 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 QTRT2Q9H974 415 aaKnown RBP10.29□□□□□ -0.76
CUX1-203ENST00000360264 PLAAQ9Y263 795 aa10.29□□□□□ -0.76
CUX1-203ENST00000360264 PRAMEP78395 509 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 RBBP7Q16576 425 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 CEP72Q9P209 647 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms