RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 MYO1GB0I1T2 1018 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 STXBP3O00186 592 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 SNAP25P60880 206 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 RUNX1T1Q06455 604 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 BFSP2Q13515 415 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 ARHGAP17Q68EM7 881 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 CLEC4FQ8N1N0 589 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 CEP170P1Q96L14 293 aa18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 H2AFY2Q9P0M6 372 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-201ENST00000360228 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.54
CACNA1A-201ENST00000360228 MTRF1O75570 445 aaKnown RBP18.39■□□□□ 0.54
CACNA1A-201ENST00000360228 ABCB5Q2M3G0 1257 aa18.39■□□□□ 0.54
CACNA1A-201ENST00000360228 CUEDC2Q9H467 287 aa18.39■□□□□ 0.54
CACNA1A-201ENST00000360228 LSG1Q9H089 658 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 RNF14Q9UBS8 474 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 TRIM54Q9BYV2 358 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 UBAP1Q9NZ09 502 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 UBA6A0AVT1 1052 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 RAB42Q8N4Z0 105 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 PARD6BQ9BYG5 372 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 CYTH3O43739 400 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 CYLC2Q14093 348 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 LRRC41Q15345 812 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 SMAD1Q15797 465 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 FASTKD1Q53R41 847 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 TTC23LQ6PF05 361 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 KCTD2Q14681 263 aa18.39■□□□□ 0.53
CACNA1A-201ENST00000360228 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 STX3Q13277 289 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 PASD1Q8IV76 773 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 CCDC87Q9NVE4 849 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 DSTYKQ6XUX3 929 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 THEM5Q8N1Q8 247 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 ERICH1Q86X53 443 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 P2RX5Q93086 422 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 PPP1R14AQ96A00 147 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 DMAP1Q9NPF5 467 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 NUP62P37198 522 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 EIF4A3P38919 411 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 CTSWP56202 376 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 SOX13Q9UN79 622 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 RWDD3Q9Y3V2 267 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 LRRC53A6NM62 1247 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 NNMTP40261 264 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 MAGOHP61326 146 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 COG1Q8WTW3 980 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 CENPPQ6IPU0 288 aa18.38■□□□□ 0.53
CACNA1A-201ENST00000360228 ATAD3BQ5T9A4 648 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 ANGPT2O15123 496 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 MEFVO15553 781 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 KCNA2P16389 499 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 ZNF658Q5TYW1 1059 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 PARP9Q8IXQ6 854 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 BATF3Q9NR55 127 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 ANAPC7Q9UJX3 599 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 IQCA1LA6NCM1 817 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 NR1H3Q13133 447 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 DIS3LQ8TF46 1054 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 DEPDC7Q96QD5 511 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 TTC7AQ9ULT0 858 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 CARMIL3Q8ND23 1372 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 GCKRQ14397 625 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 PLEKHA8Q96JA3 519 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 FARP1Q9Y4F1 1045 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 FKBP3Q00688 224 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 ASIC4Q96FT7 647 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 GCOM2Q9BZD3 368 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 UBE4BO95155 1302 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 INPP5AQ14642 412 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 SLFNL1Q499Z3 407 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 MDH1BQ5I0G3 518 aa18.37■□□□□ 0.53
CACNA1A-201ENST00000360228 IDI1Q13907 227 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 IFNL3Q8IZI9 196 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 MTERF3Q96E29 417 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 ACTN3Q08043 901 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 CCDC149Q6ZUS6 474 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 AK8Q96MA6 479 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 SP110Q9HB58 689 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 CLCN6P51797 869 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 MRPS25P82663 173 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 KRT31Q15323 416 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 TEX2Q8IWB9 1127 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 LRRC36Q1X8D7 754 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 KIAA0825Q8IV33 1275 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 BTBD18B2RXH4 712 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 CTIFO43310 598 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
CACNA1A-201ENST00000360228 TAS2R42Q7RTR8 314 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms