RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 KRIT1O00522 736 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 TMEM253P0C7T8 217 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 HNRNPH2P55795 449 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 JAM2P57087 298 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 RNASE9P60153 205 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 ARHGEF16Q5VV41 709 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 XRRA1Q6P2D8 792 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 TPCN2Q8NHX9 752 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 ACTRT1Q8TDG2 376 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 AGBL1Q96MI9 1066 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 CEP89Q96ST8 783 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 KIAA1683Q9H0B3 1180 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 ABCD1P33897 745 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 PTGER2P43116 358 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 VAMP7P51809 220 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 CDR1P51861 262 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 PSMC5P62195 406 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 KCNA1Q09470 495 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 TKFCQ3LXA3 575 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 SCN9AQ15858 1988 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 CNTNAP1P78357 1384 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 USP8P40818 1118 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RASA3Q14644 834 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 XKR9Q5GH70 373 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 NSMFQ6X4W1 530 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 EIF1ADQ8N9N8 165 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RDM1Q8NG50 284 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 HVCN1Q96D96 273 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 FAM107BQ9H098 131 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 MYOZ2Q9NPC6 264 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 SMARCAL1Q9NZC9 954 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 EHD2Q9NZN4 543 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 PACSIN2Q9UNF0 486 aaPredicted RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 TRIM49P0CI25 452 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 TRIM49CP0CI26 452 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 YWHABP31946 246 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 BAG6P46379 1132 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 MXI1P50539 228 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 GRM1Q13255 1194 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 MTMR3Q13615 1198 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 KIAA1755Q5JYT7 1200 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RNF207Q6ZRF8 634 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 UBL4BQ8N7F7 174 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 SLC16A10Q8TF71 515 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 INPP4AQ96PE3 977 aaPredicted RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 SLITRK6Q9H5Y7 841 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 UTP11Q9Y3A2 253 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 PFASO15067 1338 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 H0YCG3 227 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 CTNND1O60716 968 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 LYPLA2O95372 231 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 EIF2AK2P19525 551 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 ABCB4P21439 1286 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 GALCP54803 685 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 GLYCTKQ8IVS8 523 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 ATP6V0A1Q93050 837 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RAB17Q9H0T7 212 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 TAOK3Q9H2K8 898 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RAVER2Q9HCJ3 691 aaKnown RBP10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 SIX2Q9NPC8 291 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 GDF3Q9NR23 364 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 PICK1Q9NRD5 415 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 DMAC2Q9NW81 257 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 PIM2Q9P1W9 311 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 RASAL2Q9UJF2 1139 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 NFU1Q9UMS0 254 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 ZHX2Q9Y6X8 837 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 ZMYM2Q9UBW7 1377 aa10.09□□□□□ -0.79
GTF3C2-202ENST00000359541 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 ANKRD62A6NC57 917 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 DPEP1P16444 411 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 RPS12P25398 132 aaKnown RBP10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 CCND2P30279 289 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 FAM102BQ5T8I3 360 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 HAUS6Q7Z4H7 955 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 C12orf56Q8IXR9 622 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 KIFAP3Q92845 792 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 CDHR1Q96JP9 859 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 RMDN3Q96TC7 470 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 TAF1DQ9H5J8 278 aaPredicted RBP10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 ANKEF1Q9NU02 776 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 UBIAD1Q9Y5Z9 338 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 DDX3XO00571 662 aaKnown RBP eCLIP10.08□□□□□ -0.81e-23■■□□□ 13.6
GTF3C2-202ENST00000359541 WNT10BO00744 389 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 MAPK13O15264 365 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 SYF2O95926 243 aaKnown RBP10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 MYBL2P10244 700 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 ITGB5P18084 799 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 WDR78Q5VTH9 848 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 GJB7Q6PEY0 223 aa10.08□□□□□ -0.8
GTF3C2-202ENST00000359541 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms