RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 TAB3Q8N5C8 712 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
DNMT1-202ENST00000359526 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.08□□□□□ -0.32
DNMT1-202ENST00000359526 KRT37O76014 449 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 IRX1P78414 480 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 KCNB1Q14721 858 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 RSBN1LQ6PCB5 846 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 RNF207Q6ZRF8 634 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 GMNCA6NCL1 334 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 PPP2R2AP63151 447 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 UBE2SQ16763 222 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 NEDD1Q8NHV4 660 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 TRIM66O15016 1216 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 KRT10P13645 584 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 CHRNA3P32297 505 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 EN1Q05925 392 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 PDZD8Q8NEN9 1154 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 TBC1D16Q8TBP0 767 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.321e-7■■□□□ 14.2
DNMT1-202ENST00000359526 SLC38A10Q9HBR0 1119 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 TBK1Q9UHD2 729 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 F8W8V4 182 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 AP3M2P53677 418 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 ARL4CP56559 192 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 ACTN3Q08043 901 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
DNMT1-202ENST00000359526 GDAP1Q8TB36 358 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 SPDL1Q96EA4 605 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 KIF2CQ99661 725 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 TRIM55Q9BYV6 548 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
DNMT1-202ENST00000359526 SAT1P21673 171 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 RANBP1P43487 201 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 TTLL4Q14679 1199 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 FAM47CQ5HY64 1035 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ELAC2Q9BQ52 826 aaKnown RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ACAD9Q9H845 621 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 SEL1LQ9UBV2 794 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 NR3C1P04150 777 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ADCY1Q08828 1119 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 CYP2D7A0A087X1C5 515 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 FOXP2O15409 715 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 NTSR2O95665 410 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 NFKBIAP25963 317 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ANXA13P27216 316 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 SYT2Q8N9I0 419 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 KATNAL1Q9BW62 490 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 MTIF3Q9H2K0 278 aaKnown RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 PFASO15067 1338 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 CTIFO43310 598 aaKnown RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 PMS2P54278 862 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 DRP2Q13474 957 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 KLHL38Q2WGJ6 581 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 CRLF3Q8IUI8 442 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ITIH6Q6UXX5 1313 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ATP2C1P98194 919 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 DYNC1I2Q13409 638 aaKnown RBP13.06□□□□□ -0.32
DNMT1-202ENST00000359526 SNAPC2Q13487 334 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 BBS9Q3SYG4 887 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 ATP6V1G3Q96LB4 118 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 YY1AP1Q9H869 796 aa13.06□□□□□ -0.32
DNMT1-202ENST00000359526 TRIM49BA6NDI0 452 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 CFAP73A6NFT4 308 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 TOM1L1O75674 476 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 PHEXP78562 749 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 COASYQ13057 564 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 ST13P4Q8IZP2 240 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 COG1Q8WTW3 980 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 CENPKQ9BS16 269 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 COL5A2P05997 1499 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 TYW5A2RUC4 315 aaKnown RBP13.05□□□□□ -0.32
DNMT1-202ENST00000359526 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 SRGAP2O75044 1071 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 USP11P51784 963 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 UBXN2AP68543 259 aa13.05□□□□□ -0.32
DNMT1-202ENST00000359526 KCNH2Q12809 1159 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms