RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 NUP85Q9BW27 656 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 CCDC134Q9H6E4 229 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 NFKBIL1Q9UBC1 381 aaPredicted RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 PIK3R2O00459 728 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 GPS1Q13098 491 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 ASPRV1Q53RT3 343 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 FAM129AQ9BZQ8 928 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 NACA2Q9H009 215 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 ENO1P06733 434 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 IL10P22301 178 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 FBXW4P57775 412 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 GJC2Q5T442 439 aaPredicted RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TRIM67Q6ZTA4 783 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 RFX8Q6ZV50 586 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 ALKBH8Q96BT7 664 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TRABDQ9H4I3 376 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 MRGBPQ9NV56 204 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 ZSCAN32Q9NX65 697 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 AMACRQ9UHK6 382 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TRIM49BA6NDI0 452 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 PDE5AO76074 875 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 NQO1P15559 274 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DEFA1P59665 94 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DEFA3P59666 94 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 POLA2Q14181 598 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 EFTUD2Q15029 972 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 AP4S1Q9Y587 144 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 IQCA1LA6NCM1 817 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 WDR64B1ANS9 1081 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 PAX7P23759 505 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 GPC5P78333 572 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 NR1I3Q14994 352 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 HIF1AQ16665 826 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 MAPKAPK5Q8IW41 473 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 MFN1Q8IWA4 741 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 CMTM5Q96DZ9 223 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 CATSPER2Q96P56 530 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 YEATS2Q9ULM3 1422 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TEX33O43247 280 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 UBTFL6P0CB48 400 aaPredicted RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TBCCQ15814 346 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TTC13Q8NBP0 860 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 TEKT3Q9BXF9 490 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 CCDC90BQ9GZT6 254 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 A0A1B0GW55 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4L2P0CJ85 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4L3P0CJ86 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4L4P0CJ87 422 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4L5P0CJ88 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4L6P0CJ89 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4L7P0CJ90 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 ADCK1Q86TW2 530 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 NCLNQ969V3 563 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 FAM192AQ9GZU8 254 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 RGL1Q9NZL6 768 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 DUX4Q9UBX2 424 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 GGT7Q9UJ14 662 aa9.33□□□□□ -0.92
COL6A6-201ENST00000358511 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
COL6A6-201ENST00000358511 GLI2P10070 1586 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 LRRC36Q1X8D7 754 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 NOA1Q8NC60 698 aaKnown RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ZIM3Q96PE6 472 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 PNKPQ96T60 521 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 CCT7Q99832 543 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ATP11BQ9Y2G3 1177 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 POTEB3A0JP26 581 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 PRPSAP2O60256 369 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 MAPRE2Q15555 327 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 POTEBQ6S5H4 581 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ACCSQ96QU6 501 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 LGR6Q9HBX8 967 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 CYP4A11Q02928 519 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ZBED8Q8IZ13 594 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 DDHD1Q8NEL9 900 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 TBCKQ8TEA7 893 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 RFFLQ8WZ73 363 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 SIKE1Q9BRV8 207 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 UBN1Q9NPG3 1134 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 MTO1Q9Y2Z2 717 aaKnown RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 CASZ1Q86V15 1759 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 IFRD2Q12894 506 aaPredicted RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 MS4A14Q96JA4 679 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 SH3GL2Q99962 352 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 CYP26B1Q9NR63 512 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 PCDHA1Q9Y5I3 950 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 FOSP01100 380 aaPredicted RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ANXA13P27216 316 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 CDR2LQ86X02 465 aaPredicted RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 OR9Q1Q8NGQ5 310 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 FAF2Q96CS3 445 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms