RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CNOT8Q9UFF9 292 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ABCC4O15439 1325 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 A0A1W2PQ27 194 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 A0A1W2PQ64 194 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 A0A1W2PQD8 194 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 MEFVO15553 781 aaPredicted RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 MLH1P40692 756 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 PPP2R2AP63151 447 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 PRAMEP78395 509 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ZBED8Q8IZ13 594 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 PBXIP1Q96AQ6 731 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF263O14978 683 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 CAPRIN2Q6IMN6 1127 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 THNSL1Q8IYQ7 743 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 TMA16Q96EY4 203 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 POLR3EQ9NVU0 708 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 CLCA2Q9UQC9 943 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 EIF4G3O43432 1585 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 CHUKO15111 745 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 KCNA2P16389 499 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 FGFR4P22455 802 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 MAP4P27816 1152 aaKnown RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 PDIA2Q13087 525 aaKnown RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 TRAF7Q6Q0C0 670 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 NUP85Q9BW27 656 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 HPCAL4Q9UM19 191 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 PODXLO00592 558 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 CNGA3Q16281 694 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 SYDE2Q5VT97 1194 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 DFFAO00273 331 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 KRT72Q14CN4 511 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 SH3GL3Q99963 347 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 TMEM161AQ9NX61 479 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 ADAM22Q9P0K1 906 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 CAB39Q9Y376 341 aaPredicted RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 TSC22D4Q9Y3Q8 395 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 HSPA1AP0DMV8 641 aaKnown RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 HSPA1BP0DMV9 641 aaKnown RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 IMPDH2P12268 514 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 CIITAP33076 1130 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF746Q6NUN9 644 aaPredicted RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 EHD2Q9NZN4 543 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 YEATS2Q9ULM3 1422 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 ATP5HO75947 161 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 TERF2Q15554 542 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 RARS2Q5T160 578 aaKnown RBP11.9□□□□□ -0.5
COL11A1-202ENST00000358392 NDUFAF2Q8N183 169 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 RNF14Q9UBS8 474 aa11.9□□□□□ -0.5
COL11A1-202ENST00000358392 MFAP3LO75121 409 aa11.9□□□□□ -0.51
COL11A1-202ENST00000358392 PSAPP07602 524 aa11.9□□□□□ -0.51
COL11A1-202ENST00000358392 USP17L8P0C7I0 530 aa11.9□□□□□ -0.51
COL11A1-202ENST00000358392 EIF2AK2P19525 551 aaKnown RBP11.9□□□□□ -0.51
COL11A1-202ENST00000358392 COPB2P35606 906 aa11.9□□□□□ -0.51
COL11A1-202ENST00000358392 CACNB2Q08289 660 aaPredicted RBP11.9□□□□□ -0.51
COL11A1-202ENST00000358392 PHF21AQ96BD5 680 aa11.9□□□□□ -0.51
COL11A1-202ENST00000358392 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
COL11A1-202ENST00000358392 STXBP2Q15833 593 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 SCG3Q8WXD2 468 aaKnown RBP11.89□□□□□ -0.51
COL11A1-202ENST00000358392 KLHL11Q9NVR0 708 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 ZNF212Q9UDV6 495 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 BRAFP15056 766 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 THAP11Q96EK4 314 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 F8W8V4 182 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
COL11A1-202ENST00000358392 KRT38O76015 456 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 KRT75O95678 551 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 CENPAP49450 140 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 NCAPHQ15003 741 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 TEDDM1Q5T9Z0 273 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 BZW1Q7L1Q6 419 aaKnown RBP11.89□□□□□ -0.51
COL11A1-202ENST00000358392 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 STX19Q8N4C7 294 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 PRKAG2Q9UGJ0 569 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 V9GYQ6 96 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 K7ERI5 159 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
COL11A1-202ENST00000358392 FAM81BQ96LP2 452 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms