RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SP8Q8IXZ3 490 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 MORC4Q8TE76 937 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 CHMP6Q96FZ7 201 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 TMEM109Q9BVC6 243 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 STMN4Q9H169 189 aaPredicted RBP19.18■□□□□ 0.66
RTN4-204ENST00000357732 PIK3CDO00329 1044 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 PODXLO00592 558 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 TMOD1P28289 359 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 CHRNA3P32297 505 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 NFIAQ12857 509 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 DOK7Q18PE1 504 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 SHROOM1Q2M3G4 852 aaPredicted RBP19.17■□□□□ 0.66
RTN4-204ENST00000357732 FBXO11Q86XK2 927 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 GMCL1Q96IK5 515 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 CELF4Q9BZC1 486 aaKnown RBP19.17■□□□□ 0.66
RTN4-204ENST00000357732 OSBPL7Q9BZF2 842 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 SLC40A1Q9NP59 571 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 DMAC2Q9NW81 257 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 PPP1R9AQ9ULJ8 1098 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 FRMD4BQ9Y2L6 1034 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
RTN4-204ENST00000357732 RSPH10B2B2RC85 870 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 RSPH10BP0C881 870 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 EEF2P13639 858 aaKnown RBP19.17■□□□□ 0.66
RTN4-204ENST00000357732 RDXP35241 583 aaKnown RBP19.17■□□□□ 0.66
RTN4-204ENST00000357732 MAPK7Q13164 816 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 DCAF12L1Q5VU92 463 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 CPLX4Q7Z7G2 160 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 SLC9A9Q8IVB4 645 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 ZFPM1Q8IX07 1006 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 TEKT1Q969V4 418 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 XPO6Q96QU8 1125 aaKnown RBP19.17■□□□□ 0.66
RTN4-204ENST00000357732 DPH5Q9H2P9 285 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 PARVGQ9HBI0 331 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 OSGEPQ9NPF4 335 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 ODF2LQ9ULJ1 636 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
RTN4-204ENST00000357732 POLRMTO00411 1230 aaKnown RBP19.16■□□□□ 0.66
RTN4-204ENST00000357732 TNFAIP3P21580 790 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 DRD4P21917 467 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 ZNF131P52739 623 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 PMS2P54278 862 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 DENND2CQ68D51 928 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 GJB7Q6PEY0 223 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 BTNL9Q6UXG8 535 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 HSD17B14Q9BPX1 270 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 CCDC134Q9H6E4 229 aa19.16■□□□□ 0.66
RTN4-204ENST00000357732 FAM196BA6NMK8 535 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 CLIC2O15247 247 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 ASAP2O43150 1006 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 PHF2O75151 1096 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 DNAJC8O75937 253 aaPredicted RBP19.15■□□□□ 0.66
RTN4-204ENST00000357732 MMP13P45452 471 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 KLRC3Q07444 240 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 XRCC4Q13426 336 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 C1orf186Q6ZWK4 172 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 UBL4BQ8N7F7 174 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 ANKS4BQ8N8V4 417 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 TMEM174Q8WUU8 243 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 SGSM3Q96HU1 749 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 GPR88Q9GZN0 384 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 DNAJC18Q9H819 358 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 PCYOX1Q9UHG3 505 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 SYNPO2Q9UMS6 1093 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 VCAM1P19320 739 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 MAP2K2P36507 400 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 ADCY2Q08462 1091 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 ITIH4Q14624 930 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 QPCTQ16769 361 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 C6orf118Q5T5N4 469 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 APOBEC3HQ6NTF7 200 aaKnown RBP19.15■□□□□ 0.66
RTN4-204ENST00000357732 JAMLQ86YT9 394 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 PLCD3Q8N3E9 789 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 RPS6KC1Q96S38 1066 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 ZC3H12CQ9C0D7 883 aaKnown RBP19.15■□□□□ 0.66
RTN4-204ENST00000357732 INTS2Q9H0H0 1204 aaKnown RBP19.15■□□□□ 0.66
RTN4-204ENST00000357732 MTRF1LQ9UGC7 380 aaKnown RBP19.15■□□□□ 0.66
RTN4-204ENST00000357732 ADAMTSL1Q8N6G6 1762 aa19.15■□□□□ 0.66
RTN4-204ENST00000357732 AGTP01019 485 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 GSTA1P08263 222 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 BCRP11274 1271 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 NBPF9Q3BBW0 867 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.66
RTN4-204ENST00000357732 MYCT1Q8N699 235 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 CCT6BQ92526 530 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 P2RX7Q99572 595 aaKnown RBP19.14■□□□□ 0.66
RTN4-204ENST00000357732 TRIM51Q9BSJ1 452 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 MRIQ9BWK5 157 aa19.14■□□□□ 0.66
RTN4-204ENST00000357732 LOXHD1Q8IVV2 1947 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 KIAA0391O15091 583 aaKnown RBP19.14■□□□□ 0.65
RTN4-204ENST00000357732 P4HA2O15460 535 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
RTN4-204ENST00000357732 MYL7Q01449 175 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 PPP2R5CQ13362 524 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 CERKLQ49MI3 558 aaPredicted RBP19.14■□□□□ 0.65
RTN4-204ENST00000357732 TMEM179Q6ZVK1 233 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 DNAAF5Q86Y56 855 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 EPB41L4BQ9H329 900 aa19.14■□□□□ 0.65
RTN4-204ENST00000357732 UBR3Q6ZT12 1888 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms