RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 NMT1P30419 496 aaKnown RBP28.06■■■□□ 2.08
SSBP3-202ENST00000357475 CASP5P51878 434 aa28.06■■■□□ 2.08
SSBP3-202ENST00000357475 SEZ6LQ9BYH1 1024 aa28.06■■■□□ 2.08
SSBP3-202ENST00000357475 PCDH10Q9P2E7 1040 aa28.06■■■□□ 2.08
SSBP3-202ENST00000357475 BMP6P22004 513 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 GPC3P51654 580 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 NLRP11P59045 1033 aaKnown RBP28.05■■■□□ 2.08
SSBP3-202ENST00000357475 FAAP100Q0VG06 881 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 KIZQ2M2Z5 673 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 SYAP1Q96A49 352 aaPredicted RBP28.05■■■□□ 2.08
SSBP3-202ENST00000357475 GSDMAQ96QA5 445 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 SLC39A2Q9NP94 309 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 EXOC1Q9NV70 894 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 GDAQ9Y2T3 454 aa28.05■■■□□ 2.08
SSBP3-202ENST00000357475 LRRIQ4A6NIV6 560 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 SLC16A4O15374 487 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 GPR32O75388 356 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 RHOBTB3O94955 611 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 CTSHP09668 335 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 GAP43P17677 238 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 THPOP40225 353 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 STK4Q13043 487 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 SMYD4Q8IYR2 804 aaPredicted RBP28.04■■■□□ 2.08
SSBP3-202ENST00000357475 RNF149Q8NC42 400 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 KIAA0895Q8NCT3 520 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 ADAMTS10Q9H324 1103 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 MROH7Q68CQ1 1323 aa28.04■■■□□ 2.08
SSBP3-202ENST00000357475 A0A087WZ62 844 aa28.03■■■□□ 2.08
SSBP3-202ENST00000357475 CCDC169A6NNP5 214 aa28.03■■■□□ 2.08
SSBP3-202ENST00000357475 DMP1Q13316 513 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-202ENST00000357475 MXD4Q14582 209 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-202ENST00000357475 KCNB1Q14721 858 aa28.03■■■□□ 2.08
SSBP3-202ENST00000357475 IFT74Q96LB3 600 aa28.03■■■□□ 2.08
SSBP3-202ENST00000357475 FDXACB1Q9BRP7 624 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-202ENST00000357475 OSBPL7Q9BZF2 842 aa28.03■■■□□ 2.08
SSBP3-202ENST00000357475 GZF1Q9H116 711 aaPredicted RBP28.03■■■□□ 2.08
SSBP3-202ENST00000357475 LARSQ9P2J5 1176 aaKnown RBP28.03■■■□□ 2.08
SSBP3-202ENST00000357475 GINS2Q9Y248 185 aa28.03■■■□□ 2.08
SSBP3-202ENST00000357475 CSDE1O75534 798 aaKnown RBP28.02■■■□□ 2.08
SSBP3-202ENST00000357475 MYBP10242 640 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 NAMPTP43490 491 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 ZSCAN23Q3MJ62 389 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 ZC2HC1CQ53FD0 456 aaPredicted RBP28.02■■■□□ 2.08
SSBP3-202ENST00000357475 FAM26FQ5R3K3 315 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 FAM178BQ8IXR5 827 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 TOX2Q96NM4 488 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 MRPL44Q9H9J2 332 aaKnown RBP28.02■■■□□ 2.08
SSBP3-202ENST00000357475 IFT122Q9HBG6 1241 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 KMT5AQ9NQR1 393 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 CHRNA1P02708 482 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 NCKAP1LP55160 1127 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 MRPS6P82932 125 aaKnown RBP28.02■■■□□ 2.08
SSBP3-202ENST00000357475 MGAT3Q09327 533 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 MORC3Q14149 939 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 RPAINQ86UA6 219 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 TMEM40Q8WWA1 233 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 NLRP7Q8WX94 980 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 OSMRQ99650 979 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 MINDY3Q9H8M7 445 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 C17orf75Q9HAS0 396 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 OLFML3Q9NRN5 406 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 CDY2AQ9Y6F7 541 aa28.02■■■□□ 2.08
SSBP3-202ENST00000357475 UMODL1Q5DID0 1318 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 SYCE3A1L190 88 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 DCDC2CA8MYV0 355 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 CKBP12277 381 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 ZNF618Q5T7W0 954 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 TRAF7Q6Q0C0 670 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 NME8Q8N427 588 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 TMEM161BQ8NDZ6 487 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 SPIRE2Q8WWL2 714 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 SEL1LQ9UBV2 794 aa28.01■■■□□ 2.07
SSBP3-202ENST00000357475 K7ENM7 598 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 TLR3O15455 904 aaKnown RBP28■■■□□ 2.07
SSBP3-202ENST00000357475 ASAP2O43150 1006 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 PPP2R5AQ15172 486 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 TAS1R3Q7RTX0 852 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 ZNF720Q7Z2F6 126 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 NTPCRQ9BSD7 190 aaKnown RBP28■■■□□ 2.07
SSBP3-202ENST00000357475 IKZF4Q9H2S9 585 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 RMND1Q9NWS8 449 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 ARHGAP28Q9P2N2 729 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 MAPK8IP1Q9UQF2 711 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 USP20Q9Y2K6 914 aa28■■■□□ 2.07
SSBP3-202ENST00000357475 EDN1P05305 212 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 IQCF3P0C7M6 154 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 KCNA1Q09470 495 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 CDCA2Q69YH5 1023 aaPredicted RBP27.99■■■□□ 2.07
SSBP3-202ENST00000357475 HAUS6Q7Z4H7 955 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 RSPH3Q86UC2 560 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 DEPTORQ8TB45 409 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 SCLT1Q96NL6 688 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 CELF4Q9BZC1 486 aaKnown RBP27.99■■■□□ 2.07
SSBP3-202ENST00000357475 TANC1Q9C0D5 1861 aa27.99■■■□□ 2.07
SSBP3-202ENST00000357475 PPP1R37O75864 691 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 GCNT3O95395 438 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 FGFR4P22455 802 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 PTENP60484 403 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 TFDP1Q14186 410 aa27.98■■■□□ 2.07
SSBP3-202ENST00000357475 ZNF658Q5TYW1 1059 aaPredicted RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms