RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SPATA31A5Q5VU36 1347 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 SPATA31A7Q8IWB4 1347 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 MYH2Q9UKX2 1941 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ZBTB39O15060 712 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 SLC16A4O15374 487 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 MSH4O15457 936 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 EIF2AK2P19525 551 aaKnown RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 GUCY2CP25092 1073 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 SSTR3P32745 418 aaPredicted RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 PRELPP51888 382 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 GPC5P78333 572 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 DLGAP5Q15398 846 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 HP1BP3Q5SSJ5 553 aaPredicted RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 LIN9Q5TKA1 542 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 HGSNATQ68CP4 663 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 DCUN1D2Q6PH85 259 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 FAM47EQ6ZV65 393 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ARMC9Q7Z3E5 817 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 JAMLQ86YT9 394 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 SYT2Q8N9I0 419 aaPredicted RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 SLC30A5Q8TAD4 765 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 RUNDC3BQ96NL0 473 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ACCSQ96QU6 501 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 PRMT1Q99873 361 aaKnown RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 STK33Q9BYT3 514 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 TRIM7Q9C029 511 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 TMBIM4Q9HC24 238 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 GDF3Q9NR23 364 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 APEX2Q9UBZ4 518 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ANAPC7Q9UJX3 599 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 AGTPBP1Q9UPW5 1226 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 H0YIN7 160 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 CYP26A1O43174 497 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 HIP1RO75146 1068 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 SUN1O94901 812 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 NSFP46459 744 aaKnown RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 SLC29A2Q14542 456 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 TMED2Q15363 201 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 C6orf118Q5T5N4 469 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 WDR78Q5VTH9 848 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ZNF564Q8TBZ8 553 aaPredicted RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 C18orf8Q96DM3 657 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 CALR3Q96L12 384 aaKnown RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 PURBQ96QR8 312 aaKnown RBP7.36□□□□□ -1.23
RTN4-203ENST00000357376 AGPAT1Q99943 283 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 FAM118BQ9BPY3 351 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 NUP85Q9BW27 656 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 AIPL1Q9NZN9 384 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ZNF148Q9UQR1 794 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 PCDHGC5Q9Y5F6 944 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 ALG6Q9Y672 507 aa7.36□□□□□ -1.23
RTN4-203ENST00000357376 N4BP2Q86UW6 1770 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 LOC102724159A0A0B4J2E5 919 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 CAND2O75155 1236 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 VAMP7P51809 220 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ZNF131P52739 623 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 RWDD2BP57060 319 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 RHBDL3P58872 404 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ADCY2Q08462 1091 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 NEDD9Q14511 834 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 SLMAPQ14BN4 828 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 PWP2Q15269 919 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 LONRF1Q17RB8 773 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 RC3H1Q5TC82 1133 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 HHATQ5VTY9 493 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 LRIG3Q6UXM1 1119 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 RNF207Q6ZRF8 634 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 FBXO25Q8TCJ0 367 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 RAPGEF5Q92565 580 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 IQCGQ9H095 443 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 SUCLA2Q9P2R7 463 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 CNOT8Q9UFF9 292 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 FOXN3O00409 490 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 IPO5O00410 1097 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 DDX3XO00571 662 aaKnown RBP eCLIP7.35□□□□□ -1.23
RTN4-203ENST00000357376 ZNF844Q08AG5 666 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 DMP1Q13316 513 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 TRIM68Q6AZZ1 485 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 RINT1Q6NUQ1 792 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 PASD1Q8IV76 773 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 SRRM1Q8IYB3 904 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 XXYLT1Q8NBI6 393 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 MICAL1Q8TDZ2 1067 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 INPP4AQ96PE3 977 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 ERP44Q9BS26 406 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ANAPC5Q9UJX4 755 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 MIF4GDA9UHW6 222 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 FAM86B1E9PN63 330 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 PODXLO00592 558 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 NOL4O94818 638 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 FAM86B2P0C5J1 330 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 HSPA6P17066 643 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ALDH3A1P30838 453 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 SLC8A1P32418 973 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 HSPA9P38646 679 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms