RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LRIG3Q6UXM1 1119 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 KSR1Q8IVT5 923 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 ACTRT1Q8TDG2 376 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZFAND2BQ8WV99 257 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 DYDC1Q8WWB3 177 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 KCTD10Q9H3F6 313 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 RIOX1Q9H6W3 641 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 PTPN22Q9Y2R2 807 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 ANKRD36CQ5JPF3 1778 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 ARAP2Q8WZ64 1704 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 ITGB4P16144 1822 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 AFF2P51816 1311 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRRD1A4D1F6 860 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 MAFGO15525 162 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 PPP1R11O60927 126 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 TAL1P17542 331 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 STAT1P42224 750 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 MXRA7P84157 204 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 DR1Q01658 176 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM182BQ5T319 152 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 PTF1AQ7RTS3 328 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 LRRC57Q8N9N7 239 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCDC63Q8NA47 563 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 CTNNBL1Q8WYA6 563 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 ELAC2Q9BQ52 826 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 REEP2Q9BRK0 252 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZCWPW1Q9H0M4 648 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 BHMT2Q9H2M3 363 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 MLXIPLQ9NP71 852 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 MTMR4Q9NYA4 1195 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 TMEM59LQ9UK28 342 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 PPP1R9AQ9ULJ8 1098 aa8.9□□□□□ -0.99
CDC42SE1-201ENST00000357235 KDM3AQ9Y4C1 1321 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM196BA6NMK8 535 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 F8VZ95 297 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCDC188H7C350 402 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 CHMP2AO43633 222 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 EVI5O60447 810 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 TBCAO75347 108 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 CHN1P15882 459 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 KNOP1Q1ED39 458 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 DENND2CQ68D51 928 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 OTUD6AQ7L8S5 288 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 TBC1D1Q86TI0 1168 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLC35G2Q8TBE7 412 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 PIGOQ8TEQ8 1089 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 CHMP6Q96FZ7 201 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 OSBPL1AQ9BXW6 950 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLC5A4Q9NY91 659 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 RGS17Q9UGC6 210 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 USP21Q9UK80 565 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 DNM3Q9UQ16 869 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 DAAM1Q9Y4D1 1078 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 PCDHA1Q9Y5I3 950 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 GOLGA6L10A0A0M3HER8 536 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 ESYT2A0FGR8 921 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 DDX3XO00571 662 aaKnown RBP eCLIP8.89□□□□□ -0.992e-8■■□□□ 12.9
CDC42SE1-201ENST00000357235 RIMBP2O15034 1052 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 RGS16O15492 202 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 NR3C1P04150 777 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 GHRP10912 638 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 ADCY1Q08828 1119 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 LRRC14Q15048 493 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARSHQ5FYA8 562 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 SDCCAG8Q86SQ7 713 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 NT5DC3Q86UY8 548 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 CATSPER3Q86XQ3 398 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 ANKS4BQ8N8V4 417 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 TEKT4Q8WW24 435 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 DHX36Q9H2U1 1008 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 TMEM165Q9HC07 324 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 PICK1Q9NRD5 415 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 BZW2Q9Y6E2 419 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 A0A1B0GUL6 1792 aa8.89□□□□□ -0.99
CDC42SE1-201ENST00000357235 MYBL1P10243 752 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 FGFR4P22455 802 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 CYP2J2P51589 502 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 IFI35P80217 286 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ASPRV1Q53RT3 343 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ACBD5Q5T8D3 534 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 SYCE1Q8N0S2 351 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCDC197Q8NCU1 140 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 FBXO25Q8TCJ0 367 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 AGAP11Q8TF27 550 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PRMT1Q99873 361 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 QTRT2Q9H974 415 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 RMI1Q9H9A7 625 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 SWAP70Q9UH65 585 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 CALUO43852 315 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 UPP2O95045 317 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRIM49P0CI25 452 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRIM49CP0CI26 452 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZNF76P36508 570 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PPP4CP60510 307 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms