RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 JADE1Q6IE81 842 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PADI6Q6TGC4 694 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 FAM196AQ6ZSG2 479 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 HIPK4Q8NE63 616 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CFAP36Q96G28 342 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 C11orf70Q9BRQ4 267 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 HSPA9P38646 679 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 RAD23BP54727 409 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 NCAPHQ15003 741 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 ARMC2Q8NEN0 867 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PDZD8Q8NEN9 1154 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 XPO6Q96QU8 1125 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 MED10Q9BTT4 135 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TRAIPQ9BWF2 469 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CXorf56Q9H5V9 222 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 G3BP2Q9UN86 482 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 ARL2BPQ9Y2Y0 163 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 RAD51CO43502 376 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 KIF1CO43896 1103 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 VAMP7P51809 220 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 GALCP54803 685 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 DCAF15Q66K64 600 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 OR6B2Q6IFH4 312 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 KRT80Q6KB66 452 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 IL17RAQ96F46 866 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 ERGIC2Q96RQ1 377 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 NUDCD1Q96RS6 583 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 SERPINI1Q99574 410 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 TCP11X1B4DZS4 312 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 MX2P20592 715 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 RFX1P22670 979 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 ANXA13P27216 316 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 ERVK-24P63145 666 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 TFDP1Q14186 410 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 AGBL2Q5U5Z8 902 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 SPATA21Q7Z572 469 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 PIP4K2CQ8TBX8 421 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 CFLARO15519 480 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 KRT38O76015 456 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 ARL4AP40617 200 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 C1orf54Q8WWF1 131 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 HDAC11Q96DB2 347 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 PLAGL2Q9UPG8 496 aa16.68■□□□□ 0.26
TRAPPC11-202ENST00000357207 CYP19A1P11511 503 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 CHN1P15882 459 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 FGFR4P22455 802 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 POLD1P28340 1107 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 PPM1FP49593 454 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 PRELPP51888 382 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 ARFIP2P53365 341 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 STX1BP61266 288 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 C12orf60Q5U649 245 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 LRRC31Q6UY01 552 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 FAM160B2Q86V87 743 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 SNF8Q96H20 258 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 ZNF512BQ96KM6 892 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 TRIM51Q9BSJ1 452 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 ZWILCHQ9H900 591 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 UCHL3P15374 230 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 EIF2AK2P19525 551 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 PSMA2P25787 234 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 STAT3P40763 770 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 MDM2Q00987 491 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 KLHL38Q2WGJ6 581 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 SDCCAG3Q96C92 435 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 CYFIP2Q96F07 1278 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 ELF1P32519 619 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 USP11P51784 963 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 ART3Q13508 389 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 ANKS1AQ92625 1134 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 DYDC2Q96IM9 177 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 EPB41L4AQ9HCS5 686 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 MID2Q9UJV3 735 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 NPHP4O75161 1426 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 MYMKA6NI61 221 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 KLRC1P26715 233 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms