RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 BAG2O95816 211 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ACTN1P12814 892 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ALDH5A1P51649 535 aaPredicted RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 GRM1Q13255 1194 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ACVR2BQ13705 512 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PDIA5Q14554 519 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 MPRIPQ6WCQ1 1025 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PCDHB13Q9Y5F0 798 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 MEGF6O75095 1541 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 OPLAHO14841 1288 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 TM9SF1O15321 606 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 GYG2O15488 501 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 CENPCQ03188 943 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 EPM2AIP1Q7L775 607 aaPredicted RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 HEATR3Q7Z4Q2 680 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF444Q8N0Y2 327 aaPredicted RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 SPATA20Q8TB22 786 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 RPS6KC1Q96S38 1066 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 DIABLOQ9NR28 239 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 TMOD3Q9NYL9 352 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 TSC22D4Q9Y3Q8 395 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 P4HA2O15460 535 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 MBD4O95243 580 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PCYT1AP49585 367 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 CACNA2D1P54289 1103 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 FAM26FQ5R3K3 315 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 CABP7Q86V35 215 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 GSDMBQ8TAX9 411 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 RBM41Q96IZ5 413 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 RSL24D1Q9UHA3 163 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ITIH2P19823 946 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ADCY8P40145 1251 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 SLCO1A2P46721 670 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ERMARDQ5T6L9 678 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 DHX38Q92620 1227 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 TLR7Q9NYK1 1049 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 GCNT4Q9P109 453 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ZPR1O75312 459 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 CARSP49589 748 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 SLC18A1P54219 525 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 SLC45A4Q5BKX6 768 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 PPP2R3CQ969Q6 453 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ATP8A2Q9NTI2 1148 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 UVRAGQ9P2Y5 699 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 B4E1Z4 1266 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 KRT38O76015 456 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ANXA1P04083 346 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF844Q08AG5 666 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 FAM83BQ5T0W9 1011 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 LRRC43Q8N309 656 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 SNX29Q8TEQ0 813 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 SSU72Q9NP77 194 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 GID8Q9NWU2 228 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 VPS54Q9P1Q0 977 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 RREB1Q92766 1687 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 MTHFD1LQ6UB35 978 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF280CQ8ND82 737 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 LRGUKQ96M69 825 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 OSBPL8Q9BZF1 889 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 INTS13Q9NVM9 706 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF212Q9UDV6 495 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 DNAJB4Q9UDY4 337 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 LRRC53A6NM62 1247 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 FOXN1O15353 648 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 FKBP6O75344 327 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 LCA5LO95447 670 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 PYGBP11216 843 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 PTPN4P29074 926 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 MTA1Q13330 715 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 MED21Q13503 144 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 SYT2Q8N9I0 419 aaPredicted RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 USP6NLQ92738 828 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 STN1Q9H668 368 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 DMGDHQ9UI17 866 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 TIAM2Q8IVF5 1701 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 F8W8V4 182 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ATP6V1G1O75348 118 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 H2AFYO75367 372 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 GMNNO75496 209 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 HLA-DOAP06340 250 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF76P36508 570 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 MMP13P45452 471 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 TMED10P49755 219 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 NOP14P78316 857 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 OCRLQ01968 901 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 LY9Q9HBG7 655 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 TRAF3IP3Q9Y228 551 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 NUP188Q5SRE5 1749 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 UBR1Q8IWV7 1749 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 M0R2C6 588 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 CYTH3O43739 400 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 CTDNEP1O95476 244 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 KRT27Q7Z3Y8 459 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ACSBG1Q96GR2 724 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM237Q96Q45 408 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 MINDY4BA8MYZ0 360 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 CCNT1O60563 726 aaKnown RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 DKC1O60832 514 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms