RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 GLE1Q53GS7 698 aaKnown RBP16.56■□□□□ 0.24
PTBP1-203ENST00000356948 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
PTBP1-203ENST00000356948 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
PTBP1-203ENST00000356948 CBWD1Q9BRT8 395 aa16.56■□□□□ 0.24
PTBP1-203ENST00000356948 AGPAT3Q9NRZ7 376 aa16.56■□□□□ 0.24
PTBP1-203ENST00000356948 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
PTBP1-203ENST00000356948 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
PTBP1-203ENST00000356948 SHBGP04278 402 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 NF2P35240 595 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 ITGB3BPQ13352 177 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 GRIPAP1Q4V328 841 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 ZNF720Q7Z2F6 126 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 FAM178BQ8IXR5 827 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 SLC30A5Q8TAD4 765 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 PLEKHO2Q8TD55 490 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.243e-9■■□□□ 12.7
PTBP1-203ENST00000356948 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 COL20A1Q9P218 1284 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 PGRMC1O00264 195 aaKnown RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 FLOT1O75955 427 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 CTNNA1P35221 906 aaKnown RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 GCLMP48507 274 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 SOX10P56693 466 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 ACTN3Q08043 901 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 QPCTQ16769 361 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 RPAINQ86UA6 219 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 POP1Q99575 1024 aaKnown RBP16.55■□□□□ 0.24
PTBP1-203ENST00000356948 KIFC3Q9BVG8 833 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 ISCUQ9H1K1 167 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
PTBP1-203ENST00000356948 SORBS3O60504 671 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 GAS7O60861 476 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 RAD17O75943 681 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 TNNC1P63316 161 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 ATP6V1G3Q96LB4 118 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTBP1-203ENST00000356948 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
PTBP1-203ENST00000356948 ATP8A1Q9Y2Q0 1164 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 FOXO6A8MYZ6 492 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 SOX5P35711 763 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 FAM20AQ96MK3 541 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 LXNQ9BS40 222 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 YY1AP1Q9H869 796 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 HIP1RO75146 1068 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 PRKCIP41743 596 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 STAT1P42224 750 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 STAT2P52630 851 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 DHX9Q08211 1270 aaKnown RBP16.54■□□□□ 0.24
PTBP1-203ENST00000356948 E2F5Q15329 346 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 C2CD6Q53TS8 623 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 PODNQ7Z5L7 613 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 TMEM39BQ9GZU3 492 aa16.54■□□□□ 0.24
PTBP1-203ENST00000356948 INTS2Q9H0H0 1204 aaKnown RBP16.54■□□□□ 0.24
PTBP1-203ENST00000356948 RPSAP08865 295 aaKnown RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 ITGB5P18084 799 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 CIITAP33076 1130 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 PSMC2P35998 433 aaKnown RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 SPP2Q13103 211 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 C18orf8Q96DM3 657 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 E7EVH7 732 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 DDX3YO15523 660 aaKnown RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 EXOC3O60645 756 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 HSPA9P38646 679 aaKnown RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 SKOR1P84550 965 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 ACTRT1Q8TDG2 376 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 GMCL1Q96IK5 515 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 PLCD4Q9BRC7 762 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 PDGFDQ9GZP0 370 aaPredicted RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 NOVA2Q9UNW9 492 aaKnown RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 BMT2Q1RMZ1 405 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 SLFN11Q7Z7L1 901 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 CNPY4Q8N129 248 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 HES6Q96HZ4 224 aa16.53■□□□□ 0.24
PTBP1-203ENST00000356948 UBE2TQ9NPD8 197 aaPredicted RBP16.53■□□□□ 0.24
PTBP1-203ENST00000356948 MAPK7Q13164 816 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 MASTLQ96GX5 879 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 POLR3CQ9BUI4 534 aaPredicted RBP16.52■□□□□ 0.24
PTBP1-203ENST00000356948 TMBIM4Q9HC24 238 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 SNX24Q9Y343 169 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 NFIBO00712 420 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 RPL13P26373 211 aaKnown RBP16.52■□□□□ 0.24
PTBP1-203ENST00000356948 NAA25Q14CX7 972 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 STRIP1Q5VSL9 837 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 LLGL2Q6P1M3 1020 aa16.52■□□□□ 0.24
PTBP1-203ENST00000356948 CPXCR1Q8N123 301 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms