RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZNF699Q32M78 642 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 PASD1Q8IV76 773 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 SARS2Q9NP81 518 aaKnown RBP15.84■□□□□ 0.13
LMX1B-201ENST00000355497 KDM5AP29375 1690 aaKnown RBP15.84■□□□□ 0.13
LMX1B-201ENST00000355497 SFI1A8K8P3 1242 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 ATP1A3P13637 1013 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 EIF2AK2P19525 551 aaKnown RBP15.84■□□□□ 0.13
LMX1B-201ENST00000355497 TBC1D9BQ66K14 1250 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 GIMAP4Q9NUV9 329 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 USP17L8P0C7I0 530 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 NAALADL2Q58DX5 795 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 NLRP14Q86W24 1093 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 PARP9Q8IXQ6 854 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 THNSL1Q8IYQ7 743 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 PPM1NQ8N819 430 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 OSBPL1AQ9BXW6 950 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 ZSWIM5Q9P217 1185 aa15.84■□□□□ 0.13
LMX1B-201ENST00000355497 ASAP2O43150 1006 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 CARSP49589 748 aaKnown RBP15.83■□□□□ 0.13
LMX1B-201ENST00000355497 MAP3K10Q02779 954 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 MRPL28Q13084 256 aaKnown RBP15.83■□□□□ 0.13
LMX1B-201ENST00000355497 AP3B2Q13367 1082 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 MAPRE2Q15555 327 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 EGFL8Q99944 293 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 DBNDD1Q9H9R9 158 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 SATB2Q9UPW6 733 aa15.83■□□□□ 0.13
LMX1B-201ENST00000355497 LRRC53A6NM62 1247 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 MYL3P08590 195 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 GFPT1Q06210 699 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF394Q53GI3 561 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 PROM2Q8N271 834 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 ELMOD1Q8N336 334 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 NUP85Q9BW27 656 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 CASS4Q9NQ75 786 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 LGALS16A8MUM7 142 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 ZSCAN9O15535 394 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 PSMC1P62191 440 aaKnown RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 TERF2Q15554 542 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 LRRC8EQ6NSJ5 796 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 ZNF564Q8TBZ8 553 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 SEL1LQ9UBV2 794 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 APOA1P02647 267 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 RARS2Q5T160 578 aaKnown RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 SLITRK6Q9H5Y7 841 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 ADAM21Q9UKJ8 722 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 GPC3P51654 580 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 CC2D1AQ6P1N0 951 aaPredicted RBP15.83■□□□□ 0.12
LMX1B-201ENST00000355497 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 SNF8Q96H20 258 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 FAM167BQ9BTA0 163 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 IP6K2Q9UHH9 426 aa15.83■□□□□ 0.12
LMX1B-201ENST00000355497 PTPRTO14522 1441 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 NR3C1P04150 777 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 ROR1Q01973 937 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 ERFEQ4G0M1 354 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 TTC7AQ9ULT0 858 aaPredicted RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 LOC102724428A0A0B4J2F2 783 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 CFAP73A6NFT4 308 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 SIK1P57059 783 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 TSPY1Q01534 308 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 ITPRIPL1Q6GPH6 555 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 SLC24A3Q9HC58 644 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 DDX56Q9NY93 547 aaKnown RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 GDAQ9Y2T3 454 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 CCDC22O60826 627 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 CHRNA3P32297 505 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 SNAP25P60880 206 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 MED21Q13503 144 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 HEATR6Q6AI08 1181 aaKnown RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 SARM1Q6SZW1 724 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 TMEM270Q6UE05 265 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 CDKL3Q8IVW4 592 aaPredicted RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 ZFYVE19Q96K21 471 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 FAM49AQ9H0Q0 323 aaPredicted RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 EML4Q9HC35 981 aaKnown RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 MYBL1P10243 752 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 IL10P22301 178 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 LIFRP42702 1097 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 RAD23BP54727 409 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 DDIASQ8IXT1 998 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 GSPT2Q8IYD1 628 aaKnown RBP15.82■□□□□ 0.12
LMX1B-201ENST00000355497 MLXIPLQ9NP71 852 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 ATG3Q9NT62 314 aa15.82■□□□□ 0.12
LMX1B-201ENST00000355497 CLDN3O15551 220 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 HUS1O60921 280 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 BRAFP15056 766 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 SERPINB10P48595 397 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 PRELPP51888 382 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 PDIA2Q13087 525 aaKnown RBP15.81■□□□□ 0.12
LMX1B-201ENST00000355497 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 ICE2Q659A1 982 aa15.81■□□□□ 0.12
LMX1B-201ENST00000355497 DCAF4Q8WV16 495 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms