RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 HDXQ7Z353 690 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 OR6B3Q8NGW1 331 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 HEXIM2Q96MH2 286 aaKnown RBP13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 SUCLA2Q9P2R7 463 aaPredicted RBP13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 BZW2Q9Y6E2 419 aaKnown RBP13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 PI4K2AQ9BTU6 479 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 AP1M1Q9BXS5 423 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 SPATC1LQ9H0A9 340 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 KCNK9Q9NPC2 374 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 YWHAEP62258 255 aaKnown RBP13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 EMC2Q15006 297 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 CDO1Q16878 200 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 DNAJC18Q9H819 358 aa13.33□□□□□ -0.28
PCDHB11-201ENST00000354757 E7EVH7 732 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 MYO1CO00159 1063 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 HGSO14964 777 aaPredicted RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 STAM2O75886 525 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 CETPP11597 493 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 CLCN3P51790 818 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 GABPAQ06546 454 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 EPC2Q52LR7 807 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 ZNF667Q5HYK9 610 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 SLFN12LQ6IEE8 588 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 WDR24Q96S15 920 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PDXKO00764 312 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PHKA2P46019 1235 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 BFSP1Q12934 665 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 CEP72Q9P209 647 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 EFCAB8A8MWE9 144 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 MEIS2O14770 477 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 RNF8O76064 485 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 GYPCP04921 128 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 COPB2P35606 906 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PPFIA1Q13136 1202 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 ALCAMQ13740 583 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 LY6KQ17RY6 165 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 IFT20Q8IY31 132 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 IL31RAQ8NI17 732 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PNMA5Q96PV4 448 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 INTS2Q9H0H0 1204 aaKnown RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 RRP15Q9Y3B9 282 aaKnown RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 ABCC6O95255 1503 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 NFKBIEO00221 500 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 TRIM66O15016 1216 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 KIF4AO95239 1232 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 NR1I3Q14994 352 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 WHAMMP3Q1A5X7 153 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 TC2NQ8N9U0 490 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PXMP2Q9NR77 195 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 FHOD1Q9Y613 1164 aa13.32□□□□□ -0.28
PCDHB11-201ENST00000354757 PIK3R2O00459 728 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 BPIFB4P59827 614 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CCZ1BP86790 482 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CCZ1P86791 482 aaPredicted RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 KRT39Q6A163 491 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 GPR161Q8N6U8 529 aaKnown RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 MAGOHBQ96A72 148 aaKnown RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CBWD1Q9BRT8 395 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 LIMA1Q9UHB6 759 aaKnown RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 PALMO75781 387 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 PRKCBP05771 671 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CIITAP33076 1130 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 E2F4Q16254 413 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 OR6B2Q6IFH4 312 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 DNAAF5Q86Y56 855 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 GOLPH3Q9H4A6 298 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 FAM204AQ9H8W3 233 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 ZNF148Q9UQR1 794 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CYP26A1O43174 497 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 DSG3P32926 999 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 APBA1Q02410 837 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 ZNF211Q13398 564 aaPredicted RBP13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CCDC77Q9BR77 488 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
PCDHB11-201ENST00000354757 RARBP10826 455 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 PLS3P13797 630 aa13.3□□□□□ -0.28
PCDHB11-201ENST00000354757 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms