RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PPP1R1BQ9UD71 204 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 CYP46A1Q9Y6A2 500 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 C5P01031 1676 aa8.71□□□□□ -1.02
UBE2D3-204ENST00000349311 CCDC151A5D8V7 595 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 WTIPA6NIX2 430 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 SGSM2O43147 1006 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 SRGAP3O43295 1099 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 GNAI3P08754 354 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 SETQ01105 290 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 ANKRD1Q15327 319 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 SF1Q15637 639 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 E4F1Q66K89 784 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 CEP128Q6ZU80 1094 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 C8orf58Q8NAV2 365 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 FRS2Q8WU20 508 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 GOLGA1Q92805 767 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 DDX11Q96FC9 970 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 RNF32Q9H0A6 362 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 ZSCAN16Q9H4T2 348 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 CRTAC1Q9NQ79 661 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 TOMM22Q9NS69 142 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 RBM28Q9NW13 759 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 HYPKQ9NX55 129 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 HEG1Q9ULI3 1381 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 DISP2A7MBM2 1401 aa8.7□□□□□ -1.02
UBE2D3-204ENST00000349311 IQCA1LA6NCM1 817 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 URI1O94763 535 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 SEC31AO94979 1220 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 THBDP07204 575 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 TUBBP07437 444 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 MAP2K2P36507 400 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 TUBB2AQ13885 445 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 CHRNA2Q15822 529 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 KCNMB1Q16558 191 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 CT47A1Q5JQC4 288 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 SLC35F1Q5T1Q4 408 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 GALNT18Q6P9A2 607 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 CCDC73Q6ZRK6 1079 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 MEIS3Q99687 375 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 BPIFA3Q9BQP9 254 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 TUBB2BQ9BVA1 445 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 CARD6Q9BX69 1037 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 FUT8Q9BYC5 575 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 LSG1Q9H089 658 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 ALDH8A1Q9H2A2 487 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.69□□□□□ -1.027e-20■□□□□ 11.3
UBE2D3-204ENST00000349311 TSPYL4Q9UJ04 414 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 CFAP45Q9UL16 551 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 YBX2Q9Y2T7 364 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 KDM6AO15550 1401 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 PXDNLA1KZ92 1463 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 GLI3P10071 1580 aa8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 CICQ96RK0 1608 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-204ENST00000349311 AGRPO00253 132 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 ELL2O00472 640 aaPredicted RBP8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 MAP2K7O14733 419 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 RAB11FIP3O75154 756 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 PPFIA4O75335 1185 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 FGFR1P11362 822 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 PHKG2P15735 406 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 PSMA5P28066 241 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 TDO2P48775 406 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 TMEM67Q5HYA8 995 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 GORABQ5T7V8 394 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 ATL3Q6DD88 541 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 DENND5AQ6IQ26 1287 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 RSRC2Q7L4I2 434 aaKnown RBP8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 TADA2BQ86TJ2 420 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 CNTROBQ8N137 903 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 FAM71BQ8TC56 605 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 DNAAF4Q8WXU2 420 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 ERCC4Q92889 916 aaPredicted RBP8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 PPP1R14AQ96A00 147 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 SPATA9Q9BWV2 254 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 GPRC5CQ9NQ84 441 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 SLIT2O94813 1529 aa8.68□□□□□ -1.02
UBE2D3-204ENST00000349311 TRBV23OR9-2A0A075B6M9 112 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 MYO1BO43795 1136 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 KINO60870 393 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 PNLIPP16233 465 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 SEPHS1P49903 392 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 ATP8B2P98198 1209 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 MVKQ03426 396 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 TEFQ10587 303 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 MAP4K2Q12851 820 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 KIR3DS1Q14943 382 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 LONRF2Q1L5Z9 754 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 HSP90B2PQ58FF3 399 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 HSP90AB3PQ58FF7 597 aa8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 DNAJC21Q5F1R6 531 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-204ENST00000349311 ZNF831Q5JPB2 1677 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms