RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 TMOD1P28289 359 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 ERCC5P28715 1186 aaPredicted RBP29.86■■■□□ 2.37
SSBP4-202ENST00000348495 PPP1R2P41236 205 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 ZNF165P49910 485 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 LAMTOR4Q0VGL1 99 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 GDF6Q6KF10 455 aaPredicted RBP29.86■■■□□ 2.37
SSBP4-202ENST00000348495 SLC43A3Q8NBI5 491 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 BPIFA3Q9BQP9 254 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 MCOLN1Q9GZU1 580 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 NAT10Q9H0A0 1025 aaKnown RBP29.86■■■□□ 2.37
SSBP4-202ENST00000348495 ADGRA3Q8IWK6 1321 aa29.86■■■□□ 2.37
SSBP4-202ENST00000348495 TRIP12Q14669 1992 aaPredicted RBP29.86■■■□□ 2.37
SSBP4-202ENST00000348495 EIF3DO15371 548 aaKnown RBP eCLIP29.85■■■□□ 2.37
SSBP4-202ENST00000348495 GCNT3O95395 438 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 MNX1P50219 401 aaPredicted RBP29.85■■■□□ 2.37
SSBP4-202ENST00000348495 SMTNP53814 917 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 PTPN11Q06124 597 aaPredicted RBP29.85■■■□□ 2.37
SSBP4-202ENST00000348495 CAPSQ13938 189 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 MYOCDQ8IZQ8 938 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 TMEM161BQ8NDZ6 487 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 ZNF507Q8TCN5 953 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 DHTKD1Q96HY7 919 aaPredicted RBP29.85■■■□□ 2.37
SSBP4-202ENST00000348495 MED15Q96RN5 788 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 ARHGAP28Q9P2N2 729 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 CCDC169A6NNP5 214 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 SLC16A4O15374 487 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 STIM1Q13586 685 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 ZC2HC1CQ53FD0 456 aaPredicted RBP29.85■■■□□ 2.37
SSBP4-202ENST00000348495 RUFY4Q6ZNE9 571 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 HAUS6Q7Z4H7 955 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 KSR1Q8IVT5 923 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 FAM200AQ8TCP9 573 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 VTI1AQ96AJ9 217 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 KIFC3Q9BVG8 833 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 KMT5AQ9NQR1 393 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 STARD7Q9NQZ5 370 aa29.85■■■□□ 2.37
SSBP4-202ENST00000348495 K7ENM7 598 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 ASAP2O43150 1006 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 CYP2C9P11712 490 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 HOXD13P35453 343 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 GTF2BQ00403 316 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 ALCAMQ13740 583 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 PCDHB13Q9Y5F0 798 aa29.84■■■□□ 2.37
SSBP4-202ENST00000348495 GJA8P48165 433 aa29.83■■■□□ 2.37
SSBP4-202ENST00000348495 FAM47CQ5HY64 1035 aa29.83■■■□□ 2.37
SSBP4-202ENST00000348495 KLHL10Q6JEL2 608 aa29.83■■■□□ 2.37
SSBP4-202ENST00000348495 RHPN2Q8IUC4 686 aa29.83■■■□□ 2.37
SSBP4-202ENST00000348495 CTAGE1Q96RT6 745 aa29.83■■■□□ 2.37
SSBP4-202ENST00000348495 UBE4BO95155 1302 aa29.83■■■□□ 2.37
SSBP4-202ENST00000348495 PSMA7O14818 248 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 IQCB1Q15051 598 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 STXBP4Q6ZWJ1 553 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 MAP7D2Q96T17 732 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 CBX8Q9HC52 389 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 A0A0U1RQG5 324 aaPredicted RBP29.82■■■□□ 2.36
SSBP4-202ENST00000348495 PRPF6O94906 941 aaKnown RBP29.82■■■□□ 2.36
SSBP4-202ENST00000348495 KIF20AO95235 890 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 TFRCP02786 760 aaKnown RBP29.82■■■□□ 2.36
SSBP4-202ENST00000348495 KCNA1Q09470 495 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 PAK1Q13153 545 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 CDCA2Q69YH5 1023 aaPredicted RBP29.82■■■□□ 2.36
SSBP4-202ENST00000348495 CENPPQ6IPU0 288 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 NELFBQ8WX92 580 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 RBSNQ9H1K0 784 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 RWDD2AQ9UIY3 292 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 CTNND2Q9UQB3 1225 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 AKT3Q9Y243 479 aa29.82■■■□□ 2.36
SSBP4-202ENST00000348495 H0YCG3 227 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 SCP2P22307 547 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 POU5F1BQ06416 359 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 TAF2Q6P1X5 1199 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 SERINC5Q86VE9 423 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 DHX40Q8IX18 779 aaKnown RBP29.81■■■□□ 2.36
SSBP4-202ENST00000348495 RNF149Q8NC42 400 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 KCTD10Q9H3F6 313 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 SEMA6BQ9H3T3 888 aa29.81■■■□□ 2.36
SSBP4-202ENST00000348495 LRRIQ4A6NIV6 560 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 VTNP04004 478 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 CCNE1P24864 410 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 PMS1P54277 932 aaKnown RBP29.8■■■□□ 2.36
SSBP4-202ENST00000348495 TFDP1Q14186 410 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 L1TD1Q5T7N2 865 aaKnown RBP29.8■■■□□ 2.36
SSBP4-202ENST00000348495 DEPTORQ8TB45 409 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 P2RX5Q93086 422 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 HVCN1Q96D96 273 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 SEZ6LQ9BYH1 1024 aa29.8■■■□□ 2.36
SSBP4-202ENST00000348495 FAM49AQ9H0Q0 323 aaPredicted RBP29.8■■■□□ 2.36
SSBP4-202ENST00000348495 DENND3A2RUS2 1198 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 SRGAP2CP0DJJ0 459 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 KNOP1Q1ED39 458 aaKnown RBP29.79■■■□□ 2.36
SSBP4-202ENST00000348495 ENOX1Q8TC92 643 aaKnown RBP29.79■■■□□ 2.36
SSBP4-202ENST00000348495 NFKBIZQ9BYH8 718 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 SIP14410 1827 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 ARVCFO00192 962 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 ABCD1P33897 745 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 ZCWPW2Q504Y3 356 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 TAS1R3Q7RTX0 852 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 IFNLR1Q8IU57 520 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-202ENST00000348495 NELFCDQ8IXH7 590 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 DNAJB3Q8WWF6 145 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms