RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TRMT13Q9NUP7 481 aaKnown RBP20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 ANO10Q9NW15 660 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 LARSQ9P2J5 1176 aaKnown RBP20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 SEL1LQ9UBV2 794 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 SIP14410 1827 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 A0A0U1RQG5 324 aaPredicted RBP20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 SMIM35A0A1B0GVV1 85 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 CCDC169A6NNP5 214 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 ARVCFO00192 962 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 GNAT1P11488 350 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 HOXD13P35453 343 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 NCKAP1LP55160 1127 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 ZNF720Q7Z2F6 126 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 RHPN2Q8IUC4 686 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 SCFD1Q8WVM8 642 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 DNAJB3Q8WWF6 145 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 SPIRE2Q8WWL2 714 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 STRA6Q9BX79 667 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 KIAA0100Q14667 2235 aaKnown RBP20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 PPP1R37O75864 691 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 PRPF6O94906 941 aaKnown RBP20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 GCNT3O95395 438 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 CDK7P50613 346 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 PTPN11Q06124 597 aaPredicted RBP20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 KCNA1Q09470 495 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 TMEM62Q0P6H9 643 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 ADSSL1Q8N142 457 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 TMEM161BQ8NDZ6 487 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 IFT74Q96LB3 600 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 MED15Q96RN5 788 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 NTPCRQ9BSD7 190 aaKnown RBP20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 SENP6Q9GZR1 1112 aaPredicted RBP20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 TRPV6Q9H1D0 765 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 IKZF4Q9H2S9 585 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 TSPY26PQ9H489 355 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 C17orf75Q9HAS0 396 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 KMT5AQ9NQR1 393 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 AKT3Q9Y243 479 aa20.97■□□□□ 0.95
CHMP4A-201ENST00000347519 LRRIQ4A6NIV6 560 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 K7ENM7 598 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 SRGAP2CP0DJJ0 459 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 MAPTP10636 758 aaKnown RBP20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 COL6A1P12109 1028 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 TMOD1P28289 359 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 NAMPTP43490 491 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 DNM2P50570 870 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 DMP1Q13316 513 aaPredicted RBP20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 PTGISQ16647 500 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 TAS1R3Q7RTX0 852 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 HAUS6Q7Z4H7 955 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 SERINC5Q86VE9 423 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 MLKLQ8NB16 471 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 DHX38Q92620 1227 aaKnown RBP20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 TMEM106CQ9BVX2 250 aa20.96■□□□□ 0.95
CHMP4A-201ENST00000347519 DNAH12Q6ZR08 3092 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 B4GALT4O60513 344 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 ATN1P54259 1190 aaPredicted RBP20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 MXD4Q14582 209 aaPredicted RBP20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 COBLL1Q53SF7 1204 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 KLHL10Q6JEL2 608 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 NELFCDQ8IXH7 590 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 RNF149Q8NC42 400 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 ZNF507Q8TCN5 953 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 NLRP4Q96MN2 994 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 CDHR5Q9HBB8 845 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 ARHGAP28Q9P2N2 729 aa20.95■□□□□ 0.94
CHMP4A-201ENST00000347519 A0A087WZ62 844 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 GPC3P51654 580 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 GTF2BQ00403 316 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 PPP2R5AQ15172 486 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 MYOCDQ8IZQ8 938 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 GUF1Q8N442 669 aaKnown RBP20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 ANKLE1Q8NAG6 615 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 MAP7D2Q96T17 732 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 FDXACB1Q9BRP7 624 aaPredicted RBP20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 ADAMTS10Q9H324 1103 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 SEMA6BQ9H3T3 888 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 ST6GALNAC4Q9H4F1 302 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 CTNND2Q9UQB3 1225 aa20.94■□□□□ 0.94
CHMP4A-201ENST00000347519 DENND3A2RUS2 1198 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 ASAP2O43150 1006 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 GPR32O75388 356 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 EDN1P05305 212 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 EN2P19622 333 aaPredicted RBP20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 SMTNP53814 917 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 PMS1P54277 932 aaKnown RBP20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 STX17P56962 302 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 NLRP11P59045 1033 aaKnown RBP20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 BMT2Q1RMZ1 405 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 TRIM71Q2Q1W2 868 aaKnown RBP20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 CDCA2Q69YH5 1023 aaPredicted RBP20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 SLC39A5Q6ZMH5 540 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 DEPTORQ8TB45 409 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 PAWRQ96IZ0 340 aaKnown RBP20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 ANP32EQ9BTT0 268 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 MINDY3Q9H8M7 445 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 IFT122Q9HBG6 1241 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 USP20Q9Y2K6 914 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 ZMYM2Q9UBW7 1377 aa20.93■□□□□ 0.94
CHMP4A-201ENST00000347519 TRIM49BA6NDI0 452 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms