RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MXD3Q9BW11 206 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 MAP2K7O14733 419 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 DAPK3O43293 454 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 FSBPO95073 299 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 PHBP35232 272 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 PIK3CAP42336 1068 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 MFN1Q8IWA4 741 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 FBXL5Q9UKA1 691 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.25
SRPK1-201ENST00000346162 SPAG7O75391 227 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 FCER1AP12319 257 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 CDR2Q01850 454 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 FBXO33Q7Z6M2 555 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 APLFQ8IW19 511 aaPredicted RBP16.58■□□□□ 0.25
SRPK1-201ENST00000346162 TRIM9Q9C026 710 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 CEP72Q9P209 647 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 A0A1B0GTH6 734 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 A0A1W2PQC6 194 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 NCK2O43639 380 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 THEMIS2Q5TEJ8 643 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 NAF1Q96HR8 494 aaKnown RBP16.58■□□□□ 0.25
SRPK1-201ENST00000346162 RMI1Q9H9A7 625 aa16.58■□□□□ 0.25
SRPK1-201ENST00000346162 C21orf2O43822 256 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 POLR2BP30876 1174 aaKnown RBP16.58■□□□□ 0.24
SRPK1-201ENST00000346162 HADHQ16836 314 aaKnown RBP16.58■□□□□ 0.24
SRPK1-201ENST00000346162 RC3H1Q5TC82 1133 aaKnown RBP16.58■□□□□ 0.24
SRPK1-201ENST00000346162 MFSD4BQ5TF39 518 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 CDHR1Q96JP9 859 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 MROH1Q8NDA8 1641 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 CA8P35219 290 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 GADL1Q6ZQY3 521 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 NLRP7Q8WX94 980 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 RSAD2Q8WXG1 361 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 CHMP2BQ9UQN3 213 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 ZNF148Q9UQR1 794 aa16.58■□□□□ 0.24
SRPK1-201ENST00000346162 PECAM1P16284 738 aaPredicted RBP16.57■□□□□ 0.24
SRPK1-201ENST00000346162 KCNH2Q12809 1159 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 LLGL1Q15334 1064 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 EHD4Q9H223 541 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 SNX12Q9UMY4 172 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 MEGF6O75095 1541 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 DPYDQ12882 1025 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 RASA3Q14644 834 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 FAM83BQ5T0W9 1011 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 SYT2Q8N9I0 419 aaPredicted RBP16.57■□□□□ 0.24
SRPK1-201ENST00000346162 PARD3BQ8TEW8 1205 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
SRPK1-201ENST00000346162 L3MBTL1Q9Y468 752 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 ATP6V1G2O95670 118 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 ATF2P15336 505 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 ITIH3Q06033 890 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 TMED2Q15363 201 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 KRT80Q6KB66 452 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 C16orf87Q6PH81 154 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 KDM7AQ6ZMT4 941 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 TTLL6Q8N841 843 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 DTX3LQ8TDB6 740 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 RNF34Q969K3 372 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 ZNF341Q9BYN7 854 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 RAB21Q9UL25 225 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 C15orf41Q9Y2V0 281 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 SPATA31A1Q5TZJ5 1347 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 STK10O94804 968 aaKnown RBP16.57■□□□□ 0.24
SRPK1-201ENST00000346162 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 CYLC2Q14093 348 aaPredicted RBP16.57■□□□□ 0.24
SRPK1-201ENST00000346162 POTEGQ6S5H5 508 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 SP8Q8IXZ3 490 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 FUKQ8N0W3 1084 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 HIPK4Q8NE63 616 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 CHP1Q99653 195 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
SRPK1-201ENST00000346162 PCDHB4Q9Y5E5 795 aa16.57■□□□□ 0.24
SRPK1-201ENST00000346162 ACSL3O95573 720 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 NR3C1P04150 777 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 CA4P22748 312 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 MAPK4P31152 587 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 MAN1A1P33908 653 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 YARSP54577 528 aaKnown RBP16.56■□□□□ 0.24
SRPK1-201ENST00000346162 DR1Q01658 176 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 GRIN1Q05586 938 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 TRIM65Q6PJ69 517 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 LINC00116Q8NCU8 138 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 TRIM10Q9UDY6 481 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 ARL2BPQ9Y2Y0 163 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 AFF2P51816 1311 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 CDC25CP30307 473 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 FAM160B1Q5W0V3 765 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 GFM2Q969S9 779 aaKnown RBP16.56■□□□□ 0.24
SRPK1-201ENST00000346162 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
SRPK1-201ENST00000346162 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 ECE2O60344 883 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 PALMO75781 387 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 ANKRD40Q6AI12 368 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 CTAGE3PQ8IX95 158 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms