RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.69□□□□□ -0.54
RPL28-201ENST00000344063 PIK3CAP42336 1068 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPL28-201ENST00000344063 HERVK_113P62684 666 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 TTI2Q6NXR4 508 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 XPO6Q96QU8 1125 aaKnown RBP11.69□□□□□ -0.54
RPL28-201ENST00000344063 DCTN4Q9UJW0 460 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 ADRA2BP18089 450 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 GPC5P78333 572 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 IRX1P78414 480 aaPredicted RBP11.69□□□□□ -0.54
RPL28-201ENST00000344063 CDK17Q00537 523 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 ZNF543Q08ER8 600 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
RPL28-201ENST00000344063 PKN1Q16512 942 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 PAPD7Q5XG87 772 aaKnown RBP11.69□□□□□ -0.54
RPL28-201ENST00000344063 NUDCD1Q96RS6 583 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 DBR1Q9UK59 544 aaKnown RBP11.69□□□□□ -0.54
RPL28-201ENST00000344063 SUGT1Q9Y2Z0 365 aa11.69□□□□□ -0.54
RPL28-201ENST00000344063 A0A0G2JND7 137 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 SYF2O95926 243 aaKnown RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 BRAFP15056 766 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 SUGP1Q8IWZ8 645 aaKnown RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 GBP7Q8N8V2 638 aaPredicted RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 SYN2Q92777 582 aaPredicted RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 KRT19P08727 400 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 MYBL2P10244 700 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 COPB2P35606 906 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 PRELPP51888 382 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 DRP2Q13474 957 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 CASKIN2Q8WXE0 1202 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 VCPKMTQ9H867 229 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 PFASO15067 1338 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 EXOC1LA0A1B0GW35 172 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 STK10O94804 968 aaKnown RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 NPR1P16066 1061 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 PRLRP16471 622 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 CHRNA3P32297 505 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 ZBTB8OSQ8IWT0 167 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 XXYLT1Q8NBI6 393 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 TGS1Q96RS0 853 aaKnown RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 FLT1P17948 1338 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 STAM2O75886 525 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 SETSIPP0DME0 302 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 P4HA1P13674 534 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 SCTRP47872 440 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 POLGP54098 1239 aaPredicted RBP11.68□□□□□ -0.54
RPL28-201ENST00000344063 TMED1Q13445 227 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPL28-201ENST00000344063 CFAP57Q96MR6 1250 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 PCDHB4Q9Y5E5 795 aa11.68□□□□□ -0.54
RPL28-201ENST00000344063 JCADQ9P266 1359 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 CCT8L1PA6NM43 557 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 MAP3K7O43318 606 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 KLRC1P26715 233 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 HSD17B3P37058 310 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 RNF168Q8IYW5 571 aaPredicted RBP11.67□□□□□ -0.54
RPL28-201ENST00000344063 DTX3LQ8TDB6 740 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 MORC4Q8TE76 937 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 AS3MTQ9HBK9 375 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
RPL28-201ENST00000344063 RNF8O76064 485 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 GH2P01242 217 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 GLI1P08151 1106 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 CRKP46108 304 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 SLC8A3P57103 927 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
RPL28-201ENST00000344063 MIS12Q9H081 205 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 L3MBTL1Q9Y468 752 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 CFAP73A6NFT4 308 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 RASA4BC9J798 803 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 IGF2BP3O00425 579 aaKnown RBP eCLIP11.67□□□□□ -0.54
RPL28-201ENST00000344063 MAPK13O15264 365 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 RASA4O43374 803 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 EYA4O95677 639 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 SOX5P35711 763 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 STAT3P40763 770 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 PPP4CP60510 307 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 GPSM2P81274 684 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 DHX34Q14147 1143 aaKnown RBP11.67□□□□□ -0.54
RPL28-201ENST00000344063 PPP2R5DQ14738 602 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 SLC30A9Q6PML9 568 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 LRIG3Q6UXM1 1119 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 KDM7AQ6ZMT4 941 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 TRPM8Q7Z2W7 1104 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 RAPGEF5Q92565 580 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 CEP170P1Q96L14 293 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 F5H6K3 240 aa11.67□□□□□ -0.54
RPL28-201ENST00000344063 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms