RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PRKCEQ02156 737 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 KIF5AQ12840 1032 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 PPIL2Q13356 520 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 MIS18BP1Q6P0N0 1132 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 FAM133AQ8N9E0 248 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 PCIF1Q9H4Z3 704 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 SEPT9Q9UHD8 586 aaPredicted RBP20.32■□□□□ 0.84
HOXA9-201ENST00000343483 KCNH4Q9UQ05 1017 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 PCDHA13Q9Y5I0 950 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 DUSP10Q9Y6W6 482 aa20.32■□□□□ 0.84
HOXA9-201ENST00000343483 SERPING1P05155 500 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 ENOX2Q16206 610 aaKnown RBP20.31■□□□□ 0.84
HOXA9-201ENST00000343483 KLHDC7AQ5VTJ3 777 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 CC2D1AQ6P1N0 951 aaPredicted RBP20.31■□□□□ 0.84
HOXA9-201ENST00000343483 ABHD15Q6UXT9 468 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 SLC9A9Q8IVB4 645 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 SPAG5Q96R06 1193 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 LOC285556D6RIA3 1793 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 SSU72P8A0A1W2PR75 194 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 MACROD2A1Z1Q3 448 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 CTAGE15A4D2H0 777 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 CTAGE8P0CG41 777 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 TRIM49P0CI25 452 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 TRIM49CP0CI26 452 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 SOX10P56693 466 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 TUBB4BP68371 445 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 GTF2BQ00403 316 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 GFPT1Q06210 699 aaPredicted RBP20.31■□□□□ 0.84
HOXA9-201ENST00000343483 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
HOXA9-201ENST00000343483 MAPK8IP2Q13387 824 aaPredicted RBP20.31■□□□□ 0.84
HOXA9-201ENST00000343483 ARMC9Q7Z3E5 817 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 CTAGE6Q86UF2 777 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 CTAGE4Q8IX94 777 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 KIFC3Q9BVG8 833 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 TSGA10Q9BZW7 698 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 ZNF408Q9H9D4 720 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 A0A0G2JMZ2 1700 aa20.31■□□□□ 0.84
HOXA9-201ENST00000343483 MYH11P35749 1972 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 CNMDO75829 334 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 STBD1O95210 358 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 LCA5LO95447 670 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 SMTNP53814 917 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 NCKAP1LP55160 1127 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 ASIC2Q16515 512 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 DPY19L2P1Q6NXN4 242 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 ST6GALNAC4Q9H4F1 302 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 LCTP09848 1927 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 GTPBP10A4D1E9 387 aaKnown RBP20.3■□□□□ 0.84
HOXA9-201ENST00000343483 SOWAHBA6NEL2 793 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 ICAM3P32942 547 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 NPTX2P47972 431 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 ASTE1Q2TB18 679 aaPredicted RBP20.3■□□□□ 0.84
HOXA9-201ENST00000343483 CST9Q5W186 159 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 CBWD1Q9BRT8 395 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 R3HDMLQ9H3Y0 253 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 TXNRD2Q9NNW7 524 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 AIPL1Q9NZN9 384 aa20.3■□□□□ 0.84
HOXA9-201ENST00000343483 ENC1O14682 589 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 FMO5P49326 533 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 KLHL30Q0D2K2 578 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 BFSP1Q12934 665 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 MYBPC2Q14324 1141 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 PPP2R5AQ15172 486 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 TRAPPC11Q7Z392 1133 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 SLC17A8Q8NDX2 589 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 KIFAP3Q92845 792 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 ANKZF1Q9H8Y5 726 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 ARFGAP3Q9NP61 516 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 CYP26B1Q9NR63 512 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 KIAA1217Q5T5P2 1943 aa20.29■□□□□ 0.84
HOXA9-201ENST00000343483 ATP8B1O43520 1251 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 ATP1A1P05023 1023 aaKnown RBP20.28■□□□□ 0.84
HOXA9-201ENST00000343483 HSPA6P17066 643 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 FASTKD5Q7L8L6 764 aaKnown RBP20.28■□□□□ 0.84
HOXA9-201ENST00000343483 TMEM161BQ8NDZ6 487 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 SECISBP2LQ93073 1101 aaKnown RBP20.28■□□□□ 0.84
HOXA9-201ENST00000343483 SIX2Q9NPC8 291 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 KMT5AQ9NQR1 393 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 HDAC6Q9UBN7 1215 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 DGAT1O75907 488 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 PGK2P07205 417 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 KRT13P13646 458 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 UBA1P22314 1058 aaKnown RBP20.28■□□□□ 0.84
HOXA9-201ENST00000343483 MAGEA1P43355 309 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 MOGSQ13724 837 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 CBWD6Q4V339 395 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 CBWD3Q5JTY5 395 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 CBWD5Q5RIA9 395 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 EEPD1Q7L9B9 569 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 BSNDQ8WZ55 320 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.28■□□□□ 0.84
HOXA9-201ENST00000343483 HSPBP1Q9NZL4 362 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 TBX20Q9UMR3 447 aa20.28■□□□□ 0.84
HOXA9-201ENST00000343483 IGSF9BQ9UPX0 1349 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 DENND3A2RUS2 1198 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 SLC25A27O95847 323 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 OSBPP22059 807 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 EDNRBP24530 442 aa20.27■□□□□ 0.84
HOXA9-201ENST00000343483 GABPB1Q06547 395 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms