RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TUBB2BQ9BVA1 445 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 MYO6Q9UM54 1294 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 FER1L6Q2WGJ9 1857 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 PITPNM2Q9BZ72 1349 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 TMCO5BA8MYB1 307 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 ENC1O14682 589 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 DHX15O43143 795 aaKnown RBP14.24□□□□□ -0.13
COL18A1-201ENST00000342220 AKR1B10O60218 316 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 NR3C1P04150 777 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 IVLP07476 585 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 PSAPP07602 524 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 MNAT1P51948 309 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 TAF1CQ15572 869 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-201ENST00000342220 WHAMMP3Q1A5X7 153 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 ZSWIM2Q8NEG5 633 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 HNRNPLLQ8WVV9 542 aaKnown RBP14.24□□□□□ -0.13
COL18A1-201ENST00000342220 BRI3BPQ8WY22 251 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 NLRP4Q96MN2 994 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 PSMB7Q99436 277 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 POLR3CQ9BUI4 534 aaPredicted RBP14.24□□□□□ -0.13
COL18A1-201ENST00000342220 TUFT1Q9NNX1 390 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 A0A0G2JLL6 359 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 MACROD2A1Z1Q3 448 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 HNRNPDLO14979 420 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 EPHB6O15197 1021 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ZNF862O60290 1169 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 PLEKP08567 350 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 EPB41P11171 864 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 CNGA1P29973 690 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 AMPD2Q01433 879 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 KRT76Q01546 638 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 PRRT2Q7Z6L0 340 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 REPS2Q8NFH8 660 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 GPRC5AQ8NFJ5 357 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 OR8K1Q8NGG5 319 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 MED4Q9NPJ6 270 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 HDAC6Q9UBN7 1215 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 LGALS16A8MUM7 142 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 CXCL11O14625 94 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 N4BP1O75113 896 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 XRCC5P13010 732 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ADORA2AP29274 412 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 TCF7P36402 384 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 TMEM62Q0P6H9 643 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 PPIL2Q13356 520 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 VWA3BQ502W6 1294 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 HDXQ7Z353 690 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 RPAINQ86UA6 219 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 SGSM3Q96HU1 749 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 MBOAT7Q96N66 472 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 THAP9Q9H5L6 903 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ZNF302Q9NR11 478 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 GINM1Q9NU53 330 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 L1RE1Q9UN81 338 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 DENND3A2RUS2 1198 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 LRRN2O75325 713 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ERLIN1O75477 346 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 UBA1P22314 1058 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 EEF1GP26641 437 aaKnown RBP14.23□□□□□ -0.13
COL18A1-201ENST00000342220 DNM2P50570 870 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 CENPPQ6IPU0 288 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 MMS22LQ6ZRQ5 1243 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 ANO5Q75V66 913 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 CBWD1Q9BRT8 395 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 GBP3Q9H0R5 595 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 MYO1AQ9UBC5 1043 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 FRMD4BQ9Y2L6 1034 aa14.23□□□□□ -0.13
COL18A1-201ENST00000342220 COL2A1P02458 1487 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-201ENST00000342220 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
COL18A1-201ENST00000342220 AKAP3O75969 853 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 FDX1P10109 184 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 GSCP56915 257 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-201ENST00000342220 KCNH2Q12809 1159 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 MIS18BP1Q6P0N0 1132 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 C1orf186Q6ZWK4 172 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 OTUD6AQ7L8S5 288 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 HAUS6Q7Z4H7 955 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 ZBTB33Q86T24 672 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 MICALL1Q8N3F8 863 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 ZNF507Q8TCN5 953 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 EXOC4Q96A65 974 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 GPBP1L1Q9HC44 474 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-201ENST00000342220 FBXO40Q9UH90 709 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 CALUO43852 315 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-201ENST00000342220 ARIH2O95376 493 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 DMP1Q13316 513 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-201ENST00000342220 WDR59Q6PJI9 974 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 FAM186BQ8IYM0 893 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 CEP120Q8N960 986 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 CHST13Q8NET6 341 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 POMGNT1Q8WZA1 660 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 PLEKHA4Q9H4M7 779 aa14.22□□□□□ -0.13
COL18A1-201ENST00000342220 VPS18Q9P253 973 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms