RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ACCSQ96QU6 501 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 TUBB2BQ9BVA1 445 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 A0A0G2JLL6 359 aaPredicted RBP17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 SEC31AO94979 1220 aaKnown RBP17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 CYFIP1Q7L576 1253 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 PRRT2Q7Z6L0 340 aaPredicted RBP17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 CHST13Q8NET6 341 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 MMS19Q96T76 1030 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 PAGR1Q9BTK6 254 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 ST6GALNAC4Q9H4F1 302 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 TMEM206Q9H813 350 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 XPNPEP1Q9NQW7 623 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 HSPBP1Q9NZL4 362 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 DDX41Q9UJV9 622 aaKnown RBP17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 FBXL5Q9UKA1 691 aa17.74■□□□□ 0.43
SCNN1A-202ENST00000338748 CCDC169A6NNP5 214 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 ADSSP30520 456 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 PPP2R5AQ15172 486 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 GNPTABQ3T906 1256 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 C1orf220Q5T0J3 134 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 TRIM58Q8NG06 486 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 ATP6V0A1Q93050 837 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 CDCA5Q96FF9 252 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 PNKPQ96T60 521 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 SEPT9Q9UHD8 586 aaPredicted RBP17.73■□□□□ 0.43
SCNN1A-202ENST00000338748 ANO9A1A5B4 782 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CTAGE15A4D2H0 777 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 ANKRD63C9JTQ0 380 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 PDE2AO00408 941 aaPredicted RBP17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 PSAPP07602 524 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CTAGE8P0CG41 777 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 MYL7Q01449 175 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 PPP3CAQ08209 521 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 ALCAMQ13740 583 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CTAGE6Q86UF2 777 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 RIOX2Q8IUF8 465 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CTAGE4Q8IX94 777 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 OLIG1Q8TAK6 271 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 TIPINQ9BVW5 301 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 GPR88Q9GZN0 384 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 MYH9P35579 1960 aaKnown RBP17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 GOLGA8IPA6NC78 632 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 SOWAHBA6NEL2 793 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 GOLGA8JA6NMD2 632 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 NCK2O43639 380 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CNMDO75829 334 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 ADRB2P07550 413 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 ATP4AP20648 1035 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 KLRC1P26715 233 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 IREB2P48200 963 aaKnown RBP17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 CBX1P83916 185 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 STXBP2Q15833 593 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 NCAPG2Q86XI2 1143 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 C12orf56Q8IXR9 622 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 DNERQ8NFT8 737 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 INTS2Q9H0H0 1204 aaKnown RBP17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 ASCC2Q9H1I8 757 aaPredicted RBP17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 TXNRD2Q9NNW7 524 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 TBX20Q9UMR3 447 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 IGSF9BQ9UPX0 1349 aa17.72■□□□□ 0.43
SCNN1A-202ENST00000338748 DENND3A2RUS2 1198 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 F8VZ95 297 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 TACC1O75410 805 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 STAM2O75886 525 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 GFPT2O94808 682 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 MYBPC2Q14324 1141 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 SLC39A4Q6P5W5 647 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 LMO3Q8TAP4 145 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 IWS1Q96ST2 819 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 PSMB7Q99436 277 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 PDLIM7Q9NR12 457 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 EMSYQ7Z589 1322 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 EIF3JO75822 258 aaKnown RBP17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 RHOXF2BP0C7M4 288 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 SUPT20HL2P0C7V6 817 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 PRKCIP41743 596 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 PPATQ06203 517 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 DMP1Q13316 513 aaPredicted RBP17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 CBWD2Q8IUF1 395 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 MAP4K3Q8IVH8 894 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 XXYLT1Q8NBI6 393 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 COG1Q8WTW3 980 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 TMEM174Q8WUU8 243 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 SAAL1Q96ER3 474 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 RHOXF2Q9BQY4 288 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 CYP26B1Q9NR63 512 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 SNX12Q9UMY4 172 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 JRKLQ9Y4A0 524 aa17.71■□□□□ 0.43
SCNN1A-202ENST00000338748 SYNGAP1Q96PV0 1343 aa17.71■□□□□ 0.42
SCNN1A-202ENST00000338748 EVI5O60447 810 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 ZRANB2O95218 330 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 GCLMP48507 274 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 IRX3P78415 501 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 MOGSQ13724 837 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 KIAA0753Q2KHM9 967 aa17.7■□□□□ 0.42
SCNN1A-202ENST00000338748 PHLDB3Q6NSJ2 640 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms