RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CDC42EP1Q00587 391 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 POTEGQ6S5H5 508 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 SLC24A5Q71RS6 500 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 NLRP4Q96MN2 994 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 SCLT1Q96NL6 688 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.32
PRKN-201ENST00000338468 C1orf112Q9NSG2 853 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 COL4A3BPQ9Y5P4 624 aa17.02■□□□□ 0.32
PRKN-201ENST00000338468 DENND3A2RUS2 1198 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 K7ELQ4 463 aaPredicted RBP17.01■□□□□ 0.31
PRKN-201ENST00000338468 LAMTOR4Q0VGL1 99 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 PDIA5Q14554 519 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 EPC2Q52LR7 807 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 PSPC1Q8WXF1 523 aaKnown RBP17.01■□□□□ 0.31
PRKN-201ENST00000338468 MTRQ99707 1265 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 MINDY3Q9H8M7 445 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 NLRC5Q86WI3 1866 aa17.01■□□□□ 0.31
PRKN-201ENST00000338468 PP2D1A8MPX8 630 aa17■□□□□ 0.31
PRKN-201ENST00000338468 LAD1O00515 517 aa17■□□□□ 0.31
PRKN-201ENST00000338468 GAS2O43903 313 aaKnown RBP17■□□□□ 0.31
PRKN-201ENST00000338468 GPR37L1O60883 481 aa17■□□□□ 0.31
PRKN-201ENST00000338468 STAG3L1P0CL83 205 aa17■□□□□ 0.31
PRKN-201ENST00000338468 ARL2P36404 184 aa17■□□□□ 0.31
PRKN-201ENST00000338468 PRPHP41219 470 aa17■□□□□ 0.31
PRKN-201ENST00000338468 ATP2C1P98194 919 aaPredicted RBP17■□□□□ 0.31
PRKN-201ENST00000338468 TMEM192Q8IY95 271 aa17■□□□□ 0.31
PRKN-201ENST00000338468 FIBCD1Q8N539 461 aa17■□□□□ 0.31
PRKN-201ENST00000338468 ASAP3Q8TDY4 903 aa17■□□□□ 0.31
PRKN-201ENST00000338468 TCP11Q8WWU5 503 aa17■□□□□ 0.31
PRKN-201ENST00000338468 CLP1Q92989 425 aaKnown RBP17■□□□□ 0.31
PRKN-201ENST00000338468 SNX21Q969T3 373 aa17■□□□□ 0.31
PRKN-201ENST00000338468 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
PRKN-201ENST00000338468 RNF19AQ9NV58 838 aa17■□□□□ 0.31
PRKN-201ENST00000338468 LRWD1Q9UFC0 647 aa17■□□□□ 0.31
PRKN-201ENST00000338468 DBR1Q9UK59 544 aaKnown RBP17■□□□□ 0.31
PRKN-201ENST00000338468 PIEZO1Q92508 2521 aa17■□□□□ 0.31
PRKN-201ENST00000338468 RALGAPA2Q2PPJ7 1873 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 DGAT1O75907 488 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 SRGAP2CP0DJJ0 459 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 IBSPP21815 317 aaPredicted RBP16.99■□□□□ 0.31
PRKN-201ENST00000338468 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
PRKN-201ENST00000338468 FAM102BQ5T8I3 360 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 CMTR2Q8IYT2 770 aaKnown RBP16.99■□□□□ 0.31
PRKN-201ENST00000338468 FBXO22Q8NEZ5 403 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 ERMNQ8TAM6 284 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 SAMD11Q96NU1 681 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 MMTAG2Q9BU76 263 aaKnown RBP16.99■□□□□ 0.31
PRKN-201ENST00000338468 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 TMEM161AQ9NX61 479 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 LRFN2Q9ULH4 789 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 PCDHB7Q9Y5E2 793 aa16.99■□□□□ 0.31
PRKN-201ENST00000338468 MRPL42Q9Y6G3 142 aaKnown RBP16.99■□□□□ 0.31
PRKN-201ENST00000338468 FNDC1Q4ZHG4 1894 aaPredicted RBP16.99■□□□□ 0.31
PRKN-201ENST00000338468 KIAA1671Q9BY89 1806 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 VPS37CA5D8V6 355 aaPredicted RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 FAM86C2PA6NEL3 165 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 ASAP2O43150 1006 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 FGFR1P11362 822 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 ATF7P17544 494 aaPredicted RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 SYT1P21579 422 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 MUTP22033 750 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKN-201ENST00000338468 GLRA2P23416 452 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 CDC25AP30304 524 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 CCT6AP40227 531 aaKnown RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 PAN2Q504Q3 1202 aaKnown RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 ZNF598Q86UK7 904 aaKnown RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 ECHDC2Q86YB7 292 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 RNF149Q8NC42 400 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 ELAC1Q9H777 363 aaKnown RBP16.98■□□□□ 0.31
PRKN-201ENST00000338468 C11orf16Q9NQ32 467 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 GPRC5CQ9NQ84 441 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 LMCD1Q9NZU5 365 aa16.98■□□□□ 0.31
PRKN-201ENST00000338468 A0A0U1RQF3 1178 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 C5orf67F2Z3F1 127 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 H3BNC9 293 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 ZSCAN20P17040 1043 aaPredicted RBP16.97■□□□□ 0.31
PRKN-201ENST00000338468 BMPR1AP36894 532 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 CAPSQ13938 189 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 BRAPQ7Z569 592 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 SRGAP1Q7Z6B7 1085 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 KHSRPQ92945 711 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKN-201ENST00000338468 TRAIPQ9BWF2 469 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 INO80BQ9C086 356 aaPredicted RBP16.97■□□□□ 0.31
PRKN-201ENST00000338468 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
PRKN-201ENST00000338468 CHST12Q9NRB3 414 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 HCSTQ9UBK5 93 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 KIAA1024Q9UPX6 916 aa16.97■□□□□ 0.31
PRKN-201ENST00000338468 BRWD1Q9NSI6 2320 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms