RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SLC18A3Q16572 532 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 DCPSQ96C86 337 aaKnown RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 CHMP6Q96FZ7 201 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 CALR3Q96L12 384 aaKnown RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 RPF1Q9H9Y2 349 aaKnown RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 SENP2Q9HC62 589 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 TBC1D22BQ9NU19 505 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 TRIM10Q9UDY6 481 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 FAF1Q9UNN5 650 aaPredicted RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 PPP6R3Q5H9R7 873 aaPredicted RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 DPP9Q86TI2 863 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 SPDL1Q96EA4 605 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 INTS2Q9H0H0 1204 aaKnown RBP14.71□□□□□ -0.05
RTN4-202ENST00000337526 COL15A1P39059 1388 aa14.71□□□□□ -0.05
RTN4-202ENST00000337526 SSU72P8A0A1W2PR75 194 aa14.71□□□□□ -0.06
RTN4-202ENST00000337526 CCNI2Q6ZMN8 369 aaPredicted RBP14.71□□□□□ -0.06
RTN4-202ENST00000337526 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.06
RTN4-202ENST00000337526 PDZD8Q8NEN9 1154 aa14.71□□□□□ -0.06
RTN4-202ENST00000337526 SDCCAG3Q96C92 435 aa14.71□□□□□ -0.06
RTN4-202ENST00000337526 FAM213AQ9BRX8 229 aa14.71□□□□□ -0.06
RTN4-202ENST00000337526 DENND3A2RUS2 1198 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 COPEO14579 308 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 GYG2O15488 501 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 P4HBP07237 508 aaKnown RBP14.7□□□□□ -0.06
RTN4-202ENST00000337526 SATB1Q01826 763 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 WDR75Q8IWA0 830 aaKnown RBP14.7□□□□□ -0.06
RTN4-202ENST00000337526 TTC13Q8NBP0 860 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 HSPH1Q92598 858 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 RNPC3Q96LT9 517 aaKnown RBP14.7□□□□□ -0.06
RTN4-202ENST00000337526 PPARGC1AQ9UBK2 798 aaKnown RBP14.7□□□□□ -0.06
RTN4-202ENST00000337526 A0A0G2JLW4 131 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 TTC36A6NLP5 189 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 GYPCP04921 128 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 QARSP47897 775 aaKnown RBP14.7□□□□□ -0.06
RTN4-202ENST00000337526 TFDP2Q14188 446 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 SUPT20HL1Q3ZLR7 823 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 MUM1L1Q5H9M0 696 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 TMCO4Q5TGY1 634 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 KRT39Q6A163 491 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 SPOPLQ6IQ16 392 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 PODNQ7Z5L7 613 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 FAF2Q96CS3 445 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 MMP10P09238 476 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 CRLF3Q8IUI8 442 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 RIN2Q8WYP3 895 aaPredicted RBP14.7□□□□□ -0.06
RTN4-202ENST00000337526 EFHD1Q9BUP0 239 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 TULP4Q9NRJ4 1543 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 PDXKO00764 312 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 AKR1B1P15121 316 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 RXRBP28702 533 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 SH2D3CQ8N5H7 860 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 LRRC37BQ96QE4 947 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 REREQ9P2R6 1566 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 SPHKAPQ2M3C7 1700 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 CDC42BPBQ9Y5S2 1711 aa14.7□□□□□ -0.06
RTN4-202ENST00000337526 ATP5HO75947 161 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 SOX5P35711 763 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 CCNA1P78396 465 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 LRRC14Q15048 493 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 MS4A14Q96JA4 679 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 PFASO15067 1338 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 AGLP35573 1532 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 GOLGA8MH3BSY2 632 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 CFLARO15519 480 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 CSF1RP07333 972 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 RFX5P48382 616 aaPredicted RBP14.69□□□□□ -0.06
RTN4-202ENST00000337526 POLE2P56282 527 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 ACTN3Q08043 901 aaPredicted RBP14.69□□□□□ -0.06
RTN4-202ENST00000337526 DEPDC1BQ8WUY9 529 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 TTC25Q96NG3 672 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 KLC2Q9H0B6 622 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 ANGPTL2Q9UKU9 493 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 KRT38O76015 456 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 MX2P20592 715 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 SRLQ86TD4 932 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 CYTH2Q99418 400 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 C7orf25Q9BPX7 421 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 EIF2AK1Q9BQI3 630 aaKnown RBP14.69□□□□□ -0.06
RTN4-202ENST00000337526 WNT8AQ9H1J5 351 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 FGFR1OP2Q9NVK5 253 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 FIS1Q9Y3D6 152 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 EMSYQ7Z589 1322 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 SPECC1L-ADORA2AF8WAN1 911 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 MARK3P27448 753 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 KRT76Q01546 638 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 PLCB4Q15147 1175 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 NOA1Q8NC60 698 aaKnown RBP14.69□□□□□ -0.06
RTN4-202ENST00000337526 MID2Q9UJV3 735 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 NCOA3Q9Y6Q9 1424 aa14.69□□□□□ -0.06
RTN4-202ENST00000337526 ABCA6Q8N139 1617 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 TRPA1O75762 1119 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 RFX1P22670 979 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 GRIN1Q05586 938 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 ART3Q13508 389 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 DHX34Q14147 1143 aaKnown RBP14.68□□□□□ -0.06
RTN4-202ENST00000337526 MORC4Q8TE76 937 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 MASTLQ96GX5 879 aa14.68□□□□□ -0.06
RTN4-202ENST00000337526 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms