RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RNF149Q8NC42 400 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 CNNM3Q8NE01 707 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 NLRP4Q96MN2 994 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 SCLT1Q96NL6 688 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 GDF15Q99988 308 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.31
SEC13-201ENST00000337354 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 A0A087WZ62 844 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 MYMKA6NI61 221 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 GPR182O15218 404 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
SEC13-201ENST00000337354 NBNO60934 754 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 GADD45BO75293 160 aaPredicted RBP17.01■□□□□ 0.31
SEC13-201ENST00000337354 PLS3P13797 630 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 DARSP14868 501 aaKnown RBP17.01■□□□□ 0.31
SEC13-201ENST00000337354 SCP2P22307 547 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 PHKA2P46019 1235 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 SMTNP53814 917 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 MAPK7Q13164 816 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
SEC13-201ENST00000337354 GPNMBQ14956 572 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 KRBA2Q6ZNG9 492 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 TSHZ1Q6ZSZ6 1077 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
SEC13-201ENST00000337354 KSR1Q8IVT5 923 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 ASAP3Q8TDY4 903 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 SPIRE2Q8WWL2 714 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 TIGD1Q96MW7 591 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 OSMRQ99650 979 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 C7orf25Q9BPX7 421 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 FDXACB1Q9BRP7 624 aaPredicted RBP17.01■□□□□ 0.31
SEC13-201ENST00000337354 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 IFT122Q9HBG6 1241 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 PARVGQ9HBI0 331 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 IL23AQ9NPF7 189 aa17.01■□□□□ 0.31
SEC13-201ENST00000337354 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
SEC13-201ENST00000337354 MYH15Q9Y2K3 1946 aa17■□□□□ 0.31
SEC13-201ENST00000337354 PHLPP2Q6ZVD8 1323 aa17■□□□□ 0.31
SEC13-201ENST00000337354 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
SEC13-201ENST00000337354 RPS6KA5O75582 802 aa17■□□□□ 0.31
SEC13-201ENST00000337354 FAM13AO94988 1023 aa17■□□□□ 0.31
SEC13-201ENST00000337354 ZNF131P52739 623 aa17■□□□□ 0.31
SEC13-201ENST00000337354 PTENP60484 403 aa17■□□□□ 0.31
SEC13-201ENST00000337354 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
SEC13-201ENST00000337354 DMP1Q13316 513 aaPredicted RBP17■□□□□ 0.31
SEC13-201ENST00000337354 CAPSQ13938 189 aa17■□□□□ 0.31
SEC13-201ENST00000337354 LPIN1Q14693 890 aa17■□□□□ 0.31
SEC13-201ENST00000337354 MBTPS1Q14703 1052 aa17■□□□□ 0.31
SEC13-201ENST00000337354 PLEKHG4Q58EX7 1191 aa17■□□□□ 0.31
SEC13-201ENST00000337354 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
SEC13-201ENST00000337354 DYMQ7RTS9 669 aa17■□□□□ 0.31
SEC13-201ENST00000337354 ELOA2Q8IYF1 753 aaPredicted RBP17■□□□□ 0.31
SEC13-201ENST00000337354 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
SEC13-201ENST00000337354 APBB2Q92870 758 aa17■□□□□ 0.31
SEC13-201ENST00000337354 DNAJC19Q96DA6 116 aa17■□□□□ 0.31
SEC13-201ENST00000337354 PAGE5Q96GU1 130 aa17■□□□□ 0.31
SEC13-201ENST00000337354 TRIM9Q9C026 710 aa17■□□□□ 0.31
SEC13-201ENST00000337354 C2orf40Q9H1Z8 148 aa17■□□□□ 0.31
SEC13-201ENST00000337354 MYH9P35579 1960 aaKnown RBP16.99■□□□□ 0.31
SEC13-201ENST00000337354 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 SFI1A8K8P3 1242 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 GHRP10912 638 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 ABCD1P33897 745 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 EFNA5P52803 228 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 PEX3P56589 373 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 ZBTB8OSQ8IWT0 167 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 TMEM40Q8WWA1 233 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 SEPT8Q92599 483 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 PPP1R16BQ96T49 567 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 IFIH1Q9BYX4 1025 aaKnown RBP16.99■□□□□ 0.31
SEC13-201ENST00000337354 POLD4Q9HCU8 107 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 SEL1LQ9UBV2 794 aa16.99■□□□□ 0.31
SEC13-201ENST00000337354 HOOK1Q9UJC3 728 aaKnown RBP16.99■□□□□ 0.31
SEC13-201ENST00000337354 NOC2LQ9Y3T9 749 aaKnown RBP16.99■□□□□ 0.31
SEC13-201ENST00000337354 LRRIQ4A6NIV6 560 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 H0YCG3 227 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 GAP43P17677 238 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
SEC13-201ENST00000337354 NPTX2P47972 431 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
SEC13-201ENST00000337354 PAK2Q13177 524 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 CDCA2Q69YH5 1023 aaPredicted RBP16.98■□□□□ 0.31
SEC13-201ENST00000337354 CNKSR3Q6P9H4 555 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 PSRC1Q6PGN9 363 aaPredicted RBP16.98■□□□□ 0.31
SEC13-201ENST00000337354 DEFB128Q7Z7B8 93 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 CCDC65Q8IXS2 484 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 DBF4BQ8NFT6 615 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 BSNDQ8WZ55 320 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 STAMQ92783 540 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 KCNN1Q92952 543 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 ZNF668Q96K58 619 aaPredicted RBP16.98■□□□□ 0.31
SEC13-201ENST00000337354 FTHL17Q9BXU8 183 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 PRO3102Q9H379 93 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 AGO3Q9H9G7 860 aaKnown RBP16.98■□□□□ 0.31
SEC13-201ENST00000337354 KMT5AQ9NQR1 393 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms