RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ADRB2P07550 413 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 DLATP10515 647 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 HARSP12081 509 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 PAFAH1B1P43034 410 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 GALCP54803 685 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 FAM83AQ86UY5 434 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 DHX38Q92620 1227 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 BORCS6Q96GS4 357 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 DDX47Q9H0S4 455 aaKnown RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 FAM204AQ9H8W3 233 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 AIPL1Q9NZN9 384 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.64□□□□□ -0.87
SNCA-201ENST00000336904 GABBR1Q9UBS5 961 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 HPCAL4Q9UM19 191 aa9.64□□□□□ -0.87
SNCA-201ENST00000336904 F8VZ95 297 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 VWA5AO00534 786 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 RNF40O75150 1001 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 HEXIM1O94992 359 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 SCARA3Q6AZY7 606 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 CCNI2Q6ZMN8 369 aaPredicted RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 HAUS6Q7Z4H7 955 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 ZC3H3Q8IXZ2 948 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 PDCD2LQ9BRP1 358 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 CELF4Q9BZC1 486 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 UBXN6Q9BZV1 441 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 THAP2Q9H0W7 228 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 EHMT1Q9H9B1 1298 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 GGA3Q9NZ52 723 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 NR2E1Q9Y466 385 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 RBBP6Q7Z6E9 1792 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 FER1L6Q2WGJ9 1857 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 WDR46O15213 610 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 PJA2O43164 708 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 P4HBP07237 508 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 GAP43P17677 238 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 QARSP47897 775 aaKnown RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 BFSP1Q12934 665 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 HSP90B2PQ58FF3 399 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 ANO5Q75V66 913 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 PPM1KQ8N3J5 372 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 ZBED3Q96IU2 234 aaPredicted RBP9.63□□□□□ -0.87
SNCA-201ENST00000336904 GPR88Q9GZN0 384 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
SNCA-201ENST00000336904 ZNF862O60290 1169 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 SYF2O95926 243 aaKnown RBP9.62□□□□□ -0.87
SNCA-201ENST00000336904 STAT1P42224 750 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 BMT2Q1RMZ1 405 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 DAB2IPQ5VWQ8 1189 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 MOB2Q70IA6 237 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 ZBTB10Q96DT7 871 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 CENPHQ9H3R5 247 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 PXMP2Q9NR77 195 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 HSPBP1Q9NZL4 362 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 SEPT9Q9UHD8 586 aaPredicted RBP9.62□□□□□ -0.87
SNCA-201ENST00000336904 RAD51CO43502 376 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
SNCA-201ENST00000336904 TCP1P17987 556 aaKnown RBP9.62□□□□□ -0.87
SNCA-201ENST00000336904 MARCKSL1P49006 195 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 JAM2P57087 298 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 SETQ01105 290 aaPredicted RBP9.62□□□□□ -0.87
SNCA-201ENST00000336904 TUBB2AQ13885 445 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 TMEM132BQ14DG7 1078 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 RPS6KA1Q15418 735 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 MTERF2Q49AM1 385 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 MEI1Q5TIA1 1274 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 WDR93Q6P2C0 686 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 B3GNT9Q6UX72 402 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 TMEM130Q8N3G9 435 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 HNRNPLLQ8WVV9 542 aaKnown RBP9.62□□□□□ -0.87
SNCA-201ENST00000336904 CEP170P1Q96L14 293 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 TUBB2BQ9BVA1 445 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 ADGRA3Q8IWK6 1321 aa9.62□□□□□ -0.87
SNCA-201ENST00000336904 ATAD5Q96QE3 1844 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 TBC1D12O60347 775 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 BUB1BO60566 1050 aaPredicted RBP9.61□□□□□ -0.87
SNCA-201ENST00000336904 RGS20O76081 388 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 KRT14P02533 472 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 NR3C2P08235 984 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 CAPN2P17655 700 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 CYP2C19P33261 490 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SOX5P35711 763 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 HNRNPH2P55795 449 aaKnown RBP9.61□□□□□ -0.87
SNCA-201ENST00000336904 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNCA-201ENST00000336904 TNIP1Q15025 636 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 CFAP221Q4G0U5 840 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 ZNF662Q6ZS27 426 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SEPT14Q6ZU15 432 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 PEX26Q7Z412 305 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 METTL13Q8N6R0 699 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 OR2W6PQ8NHA6 318 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SEMA4DQ92854 862 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 METTL14Q9HCE5 456 aaKnown RBP9.61□□□□□ -0.87
SNCA-201ENST00000336904 UBIAD1Q9Y5Z9 338 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms