RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DLGAP3O95886 979 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 PAPOLAP51003 745 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 VCPP55072 806 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 INPP5AQ14642 412 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CCDC103Q8IW40 242 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 WDR24Q96S15 920 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF577Q9BSK1 485 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 C16orf96A6NNT2 1141 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 F5H423 210 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 AKAP10O43572 662 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF18P17022 549 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 POU5F1BQ06416 359 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 ANKRD7Q92527 254 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 RBM41Q96IZ5 413 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 PARVGQ9HBI0 331 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 NOD2Q9HC29 1040 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 NRBP2Q9NSY0 501 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CHRNA3P32297 505 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CNOT8Q9UFF9 292 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 STAP2Q9UGK3 403 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 HPCAL4Q9UM19 191 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 GOLGA8IPA6NC78 632 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 GOLGA8JA6NMD2 632 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 H0YC42 278 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 PLA2G4BP0C869 781 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 TFAMQ00059 246 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 SMAD1Q15797 465 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 RSRC2Q7L4I2 434 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 TRPM8Q7Z2W7 1104 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 TLK2Q86UE8 772 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 ERICH1Q86X53 443 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 NIM1KQ8IY84 436 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CASP10Q92851 521 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CNBD2Q96M20 576 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 KIF2CQ99661 725 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CCDC134Q9H6E4 229 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 CPSF3Q9UKF6 684 aaKnown RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 MAP3K19Q56UN5 1328 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 IGF2BP3O00425 579 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 ATXN3P54252 364 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-201ENST00000334504 GPS1Q13098 491 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 MAPRE2Q15555 327 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 HORMAD1Q86X24 394 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 DDHD1Q8NEL9 900 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 LZICQ8WZA0 190 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 INPP5DQ92835 1189 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 EME1Q96AY2 570 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 BRIP1Q9BX63 1249 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 BRD8Q9H0E9 1235 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 PCDHA1Q9Y5I3 950 aa10.43□□□□□ -0.74
COL4A6-201ENST00000334504 TBC1D4O60343 1298 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 GPC5P78333 572 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 DNAL1Q4LDG9 190 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PLEKHM3Q6ZWE6 761 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PATL1Q86TB9 770 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 SCG3Q8WXD2 468 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 HEXIM2Q96MH2 286 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 SUGT1Q9Y2Z0 365 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 TRPM2O94759 1503 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF185O15231 689 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 LZTS3O60299 673 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 RPS6P62753 249 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 TRIP10Q15642 601 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 CYFIP2Q96F07 1278 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 HIC2Q96JB3 615 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 VIPAS39Q9H9C1 493 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 TLR7Q9NYK1 1049 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 M0R3G1 203 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 BCAMP50895 628 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 ZMYM1Q5SVZ6 1142 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 CCDC137Q6PK04 289 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 STX19Q8N4C7 294 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PRPF18Q99633 342 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 KLHL25Q9H0H3 589 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 DONSONQ9NYP3 566 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 AGTP01019 485 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 DMPKQ09013 629 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 TFDP1Q14186 410 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 RBBP7Q16576 425 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 HDDC2Q7Z4H3 204 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 DDIASQ8IXT1 998 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 IP6K1Q92551 441 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 TMA16Q96EY4 203 aaKnown RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 TRABDQ9H4I3 376 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 POLD4Q9HCU8 107 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PITPNM2Q9BZ72 1349 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 UHRF1BP1LA0JNW5 1464 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 MAGEA13PA6NCF6 341 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 CTSWP56202 376 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 RAB14P61106 215 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 LRRC24Q50LG9 513 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms